Yersinia pseudotuberculosis IP 31758 (serotype O 1b): YpsIP31758_2563
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Entry
YpsIP31758_2563 CDS
T00570
Name
(GenBank) conserved hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ypi
Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
Brite
KEGG Orthology (KO) [BR:
ypi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ypi01002
]
YpsIP31758_2563
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ypi01011
]
YpsIP31758_2563
Peptidases and inhibitors [BR:
ypi01002
]
Cysteine peptidases
Family C82
YpsIP31758_2563
Peptidoglycan biosynthesis and degradation proteins [BR:
ypi01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
YpsIP31758_2563
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
ABS48038
UniProt:
A0A0U1QZ42
LinkDB
All DBs
Position
complement(2903969..2905678)
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AA seq
569 aa
AA seq
DB search
MSVAQSRSQLLAALPKDVVPLYAAELASLYAANQMQPMWQDRVAVQRFQQQLAEVGLSGI
QPQFMQWVKWLSEPEITGMARDIILSDAMLGYLHFISGVGANGSVWLYSNVPYKMAMPPA
AVLNAWQKAVNEGSTASYLASLAPQHPQYDKMQQALKLMLADRRPWPQMPTGPSLRPGQL
SDDIPALREILDRTGMLHPTTPVKAPEVIPVENPTVAVVNDDLSVDEEKNRTQTNSLVVS
PSAVSVPESDDAAPAPMPPVSVVTLTDNIYTPELVEAVKRFQQWQGLTDDGVIGPRTREW
LNVSPQTRATLLALNIQRLRILPGHVDNGIMVNIPNYSLNYYKDGAEVLSSRVIVGRPSR
KTPLMSSALNNVVVNPPWNVPTSLVRQDIVPKARNDAGYFQRNGYTVLSGWSNDAEVINP
SMIDWSIISPNNFPYRLRQAPGANNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSS
GCVRVNKASDLANMLLQDAGWNDARVSSKVKQGDTTYVNIRQRVPVQLYYLTAWVAEDGK
PQFRTDIYNYDKMVRSGAQISQQAEFLLQ
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggctcaaagtcgttcgcaattattggccgcgcttccaaaagatgtcgtgcca
ctctatgctgcggaattagcgtcattatatgcggcgaaccaaatgcagcctatgtggcaa
gaccgggttgctgttcaacgttttcagcaacagttagcggaggttgggctttcaggcatt
caaccgcagtttatgcaatgggttaaatggttgagcgagccagaaatcaccggtatggcg
cgtgatattattctatcggatgcgatgctgggttatttacactttatttccggtgtcggt
gctaatggcagtgtttggttatacagtaatgtgccttataaaatggccatgccgcctgca
gcagttttaaacgcctggcagaaagcggtcaatgaaggctcgacagcctcttatctggcg
tcgttggctccgcagcatccgcaatacgataaaatgcaacaggcgttgaagttgatgcta
gcagaccgacgcccgtggccacagatgcctactgggccaagtttacggccggggcaactt
agcgacgatatccctgcattgcgggaaatccttgaccgaacgggtatgttgcacccaaca
acccccgtgaaagcgccagaggtgatccctgtggagaaccctacggtggccgtcgttaat
gacgatctctctgttgatgaagaaaaaaatcggactcagaccaacagcttggtggtcagc
ccatcagccgtctctgtccctgagagcgatgatgcggcacccgcaccgatgcctcccgtg
agcgtggtcacgttaactgacaatatctatactcctgagttggtagaagccgttaaacgc
ttccagcaatggcaggggctcactgatgacggtgttatcggcccccgtacccgcgaatgg
ttgaatgtctcgccacaaacgcgggccacgttattggcattgaatatccagcgattacgt
attttgccggggcatgttgataacgggattatggttaatatcccaaattattctctgaat
tattataaagatggggccgaagtgctttcatctcgggtgattgttggccgtccaagtcgt
aaaacgcccctgatgagtagtgcgttgaataatgtggtggtgaacccgccgtggaacgtg
ccgacctcattggtacggcaggatatcgtgcccaaagcacgtaacgatgccgggtatttt
cagcgtaatggctataccgtgttgtccggatggagtaatgatgctgaagtgatcaatcct
tcaatgattgactggagtattatctcgccgaataacttcccttaccgtttgcgtcaggca
ccaggtgccaataactcgttagggcggttcaaatttaacatgccaagttctgatgctatc
tatttacatgacacgccgaatcatggcctgttccaaaaggacattcgcgccctgagttca
ggttgtgtccgtgtcaataaagcgtctgatttagcgaacatgctgctgcaagatgctggc
tggaatgatgcacgggtctcttccaaggtaaaacaaggtgataccacctacgtcaatatc
cgccagcgcgttccggtgcaattgtattatctgacagcatgggttgcggaagacggtaaa
ccgcagtttagaacagatatttacaattatgataaaatggtgcgatctggtgcacaaatc
tcacagcaggctgagtttttattgcaataa
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