Yersinia pseudotuberculosis IP 31758 (serotype O 1b): YpsIP31758_2883
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Entry
YpsIP31758_2883 CDS
T00570
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ypi
Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
Pathway
ypi00020
Citrate cycle (TCA cycle)
ypi00190
Oxidative phosphorylation
ypi00650
Butanoate metabolism
ypi00720
Other carbon fixation pathways
ypi01100
Metabolic pathways
ypi01110
Biosynthesis of secondary metabolites
ypi01120
Microbial metabolism in diverse environments
ypi01200
Carbon metabolism
Module
ypi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ypi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ypi_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ypi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
YpsIP31758_2883 (sdhA)
00650 Butanoate metabolism
YpsIP31758_2883 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
YpsIP31758_2883 (sdhA)
00720 Other carbon fixation pathways
YpsIP31758_2883 (sdhA)
Enzymes [BR:
ypi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
YpsIP31758_2883 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
HI0933_like
Pyr_redox_2
DAO
Thi4
FAD_oxidored
FAD_binding_3
BEX
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
ABS49404
UniProt:
A0A0U1R2C3
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All DBs
Position
complement(3254040..3255806)
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AA seq
588 aa
AA seq
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MNLPIREFDAVVVGAGGAGMRAALQISQMGLSCALISKVFPTRSHTVSAQGGITVALGNT
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAVLELEHMGLPFSRLEDGSIYQRPFG
GQSLNFGGGQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAFVGC
TAINIETGEVVYFKARATILATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCDGPWGPHAKLKLDHLGKDVLESRLPGILELSRTFAHVDPIKEPIPVIPTCHYMMGGI
PTKVTGQAITVNEKGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGMHLQ
ESLMEQGASRDASESDIEASLARMNRWNNTRSGEDPVEIRKALQACMQNNFSVFREGDAM
AKGLEELKTIRERLQNARLDDTSSEFNTQRIECLELDNLMETAFSTAVSANFRTESRGAH
SRFDFPDRDDVNWLCHSLYLPGTESMTRREVNMQPKLREAFPPKVRSY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgccaatcagagagtttgatgcagttgttgtcggtgcaggtggtgccggtatg
cgtgccgccctgcaaatttcacaaatgggcctgtcttgcgccctgatatctaaagtcttc
cctacccgttcccataccgtatctgcgcagggggggattaccgttgcgctgggtaatacc
catgaagataactgggaatggcacatgtacgatacggtaaagggttccgattatatcggc
gatcaggatgccatcgaatatatgtgtaaaaccggtccggaagcggttctggaattggag
cacatgggtttacctttctcccgtttagaggatgggagcatttatcagcgtccatttggg
gggcagtcactgaactttggcggtgggcaagctgcgcgtacagcggctgcagctgaccgc
accggtcatgcgttgttacacaccctttatcagcaaaacctgaaaaaccacaccactatt
ttctctgaatggtatgcactggatttggtgaagaatcaggacggcgcttttgtcggttgt
actgctattaatattgaaaccggcgaagtcgtctatttcaaagcacgggccacaatattg
gcaactggcggtgctgggcgtatttaccaatcaacaaccaatgcgcacattaataccggt
gatggtgttggtatggccttgcgtgctggagtcccggtgcaggacatggaaatgtggcag
ttccacccgaccggtattgccggtgcgggtgtattagtgactgaaggctgccgcggtgaa
ggggggtatttactgaataaacacggtgaacgcttcatggaacgttatgccccgaacgcc
aaagatttggcgggtcgtgatgtagtggcacgttccattatgattgaaatccgtgaagga
cgtggttgtgacggtccttggggcccacatgccaaactgaaattggatcacttaggtaaa
gatgtgcttgaatcccgtctgccgggtattcttgagctgtcgcgcacctttgcacacgtt
gacccgatcaaagaaccgatcccggttatccctacttgccattatatgatggggggaatt
ccgactaaagtgacgggtcaggcgattaccgtaaatgaaaagggtgaggatgttgtgatc
cccggcttgtttgctgtaggcgaaattgcctgtgtttccgtccacggtgcgaaccgcttg
ggagggaactcattactggacttagtggtatttggtcgtgctgccggtatgcacctgcaa
gaatcattgatggagcagggcgcaagccgcgatgccagtgagtcagatatcgaagcctct
ctggctcgcatgaatcgctggaataatacccgttcaggtgaagatccagttgaaatccgt
aaagcattgcaagcctgtatgcagaacaatttctccgtgttccgcgaaggcgatgcgatg
gcaaaagggttggaagagctgaaaactatccgtgaacgtttgcaaaatgcccgtttggat
gacacttccagtgaattcaatactcagcgtattgagtgcctggagctggataacctgatg
gaaactgcgttttcaaccgctgtgtcggcaaacttccgtaccgagagccgaggtgcccat
agccgcttcgatttcccggatcgtgatgatgtgaactggctgtgccattcactgtatttg
ccaggtactgagagcatgacccgccgtgaggtaaacatgcaacctaagctacgcgaggca
ttcccgccgaaagtgcgttcttattga
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