Yersinia pseudotuberculosis IP 31758 (serotype O 1b): YpsIP31758_3492
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Entry
YpsIP31758_3492 CDS
T00570
Symbol
radA
Name
(GenBank) DNA repair protein radA
KO
K04485
DNA repair protein RadA/Sms
Organism
ypi
Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
Brite
KEGG Orthology (KO) [BR:
ypi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypi03400
]
YpsIP31758_3492 (radA)
DNA repair and recombination proteins [BR:
ypi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
YpsIP31758_3492 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
GvpD_P-loop
RecA
AAA_22
SLFN-g3_helicase
AAA_14
AAA_16
Rad51
ABC_tran
NTPase_1
nSTAND3
DUF7125
AAA
AAA_24
AAA_5
cobW
Zeta_toxin
AAA_29
DZR
Viral_helicase1
Herpes_Helicase
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
ABS47932
UniProt:
A0A0U1QYV2
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All DBs
Position
complement(3940332..3941714)
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AA seq
460 aa
AA seq
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MAKAPKRAFVCNECGADYPRWQGQCSACNAWNTITEVRLAAVASSSRNDRFVGYAGDAGV
SRVQKLSDISLEELPRFSTGFLEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLS
ENMKTLYVTGEESLQQVAMRAHRLGLPTAGLNMLSETSIEQICLIAEQEQPRLMVIDSIQ
VMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VMLDGDGDSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTAGSSV
MVVWEGTRPLLVEIQALVDHSMMSNPRRVAVGLEQNRLAILLAVLHRHGGLQMSDQDVFV
NVVGGVKVTETSADLALLMSLVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA
KHGFKRAIVPYANMPKKPLPNMQVFGVKKLADALAVLEDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcacctaaacgggcgtttgtctgtaatgaatgtggcgcagattatccgcgt
tggcaggggcaatgcagcgcctgtaacgcctggaataccattaccgaagtcaggctggcg
gcggtagcgtcatcgtctcgtaatgaccgttttgttggttatgctggcgatgccggtgtt
agccgggtacagaagctgtccgatattagtctggaggagctgccgcgcttctcaaccggc
ttcctcgagtttgatcgggtgctgggcggcggggtggtaccgggcagtgccattctgatt
ggcggtaaccccggcgcaggcaaaagtactctattgctgcaaaccctctgcaaactgtcg
gaaaacatgaaaaccctgtatgtcactggcgaagagtcgttgcagcaggtcgccatgcgt
gcacaccgtctgggcctgcccacggcggggctgaatatgttgtcggaaaccagtatcgag
cagatttgcctgatagcagagcaagaacagccacggctgatggtcattgactccattcaa
gtaatgcatatggcggatatccaatcatcgccgggcagtgtggcgcaagtgcgcgaaacc
gcggcttatctgactcgttttgctaaaacccggggtgtcgccatcgtgatggtgggacat
gtgaccaaagacggttcgctggccgggccgaaagtattagaacactgtattgactgctcc
gtgatgctcgatggtgatggcgactcacgctttcgtactctgcgtagccacaaaaaccgc
tttggtgctgttaacgaactgggtgtgtttgccatgaccgagcaaggtctacgggaagtc
agtaatccatcggcgatctttttgagccgtggcgatgaagtgaccgcaggcagttcagtg
atggtggtgtgggaagggactcgcccattgctggtggagatccaagcgctggtagatcat
tcgatgatgtcgaatccacgccgggtcgctgtcgggctggaacaaaaccgcttggccatc
ttattggctgttttacaccgccacggtggtttgcagatgtcagatcaagacgtgttcgtt
aacgtcgttggcggggtgaaagtcactgaaaccagcgctgatctggcattgttgatgtcg
ctggtctccagtctgcgtgaccgcccattaccgcaagatttagtggtgtttggcgaggtg
gggctggccggtgaaatccgcccggtaccaagtggtcaggagcgtatctccgaggcggca
aagcacggttttaaacgtgccatcgtgccttatgccaatatgcctaaaaagccgctaccc
aatatgcaggttttcggggtaaaaaaactggccgatgcgttggctgttttagaagattta
taa
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