Yersinia pseudotuberculosis IP 31758 (serotype O 1b): YpsIP31758_3556
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Entry
YpsIP31758_3556 CDS
T00570
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
ypi
Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
Pathway
ypi00230
Purine metabolism
ypi00240
Pyrimidine metabolism
ypi01100
Metabolic pathways
ypi01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
ypi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
YpsIP31758_3556 (nrdD)
00240 Pyrimidine metabolism
YpsIP31758_3556 (nrdD)
Enzymes [BR:
ypi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
YpsIP31758_3556 (nrdD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
Zn_Tnp_IS91
DUF7129
Motif
Other DBs
NCBI-ProteinID:
ABS48558
UniProt:
A0A0U1R0C5
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Position
4017827..4019965
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AA seq
712 aa
AA seq
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MKTVVIKRDGCQVPFDEVRIKEAVERAALAVGVVDADYCATVARVVAQTMENQPKVDIRE
IQNAVENQLMAGQYKQLARAYIEYRHDRDISRELRGRLNQEIQGLVEQSNKALLNENANK
DSKVIPTQRDLLAGIVAKHYAKQHLLPRDVVLAHERGEIHYHDLDYAPFFPMFNCMLIDL
EGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTESF
NKHKAVAEEWQIPDVAGYAMSRTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS
WQSRMIQQAILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKFGDANYDIKQLALECATKR
MYPDILNYDQVVKVTGSFKTPMGCRSFLGVYEEEGQQIHDGRNNLGVISLNLPRIALEAK
GDENQFWQLLDERLLIAKKALMTRIARLEGIKARVAPILYMEGACGVRLQADDNIAEIFK
NGRASISLGYIGIHETINALFGHQTHLFDDQKLREKAIAIVAHLKQATDDWKDETGYAFS
LYSTPSENLCDRFCRLDTAEFGVVEGVTDKGYYTNSFHLDVEKKVNPYDKLDFEAPYPPL
ANGGFICYGEYPNLQHNIRALEDVWDYSYSRVPYYGTNTPIDECYECGFTGEFSCTSKGF
TCPKCGNHEPSKVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLANGQLG
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacagtagtgattaaacgggacggctgccaggtaccttttgatgaagttcgtatc
aaagaggctgttgagcgcgcagcattagctgttggcgtggtcgatgccgattattgtgca
accgttgcccgagtggtcgctcaaacgatggaaaaccagccgaaggttgatatccgtgaa
attcaaaacgcggtagaaaaccaactgatggcgggtcaatacaaacagttagcccgggct
tacatcgaatatcgtcatgatcgtgatatctcacgggaactgcgtggccgcttgaatcag
gaaattcaagggttagtggagcaaagcaacaaagcactgctgaacgaaaatgccaacaaa
gacagcaaagtgatccctacccagcgcgatctgttggccggtattgttgccaagcactac
gctaaacagcatcttttgccccgcgatgtggtgctggcccatgagcgcggcgaaattcac
tatcatgatctggattacgcgccgttcttcccgatgttcaactgtatgttgattgatttg
gaaggcatgttaacccaaggttttaaaatgggtaatgcggaaatagagccgccaaaatcc
atttctaccgcaaccgctgtaaccgcacaaattatcgcgcaggttgccagccatatctat
ggtggcaccaccattaaccgtattgatgaagttttggccccttttgtcacggaaagcttt
aataaacataaggctgtcgccgaagagtggcagatccctgatgttgcaggttatgccatg
tcgcgtaccgaaaaagagtgttacgacgccttccagtcactggagtatgaggtcaataca
ctgcataccgcgaatggccaaacgcccttcgtcaccttcggttttggcttgggcaccagt
tggcaatcacgcatgatccagcaggctattttgcgtaatcgtattgcgggcttgggtaaa
aaccgtaaaacggcggtattcccaaaactggtatttgctatccgcgatggcctgaaccac
aaatttggcgatgctaactacgatatcaaacagttggcgctggagtgcgcaaccaagcgc
atgtatccagatattcttaattatgatcaagtggttaaggtcactggctcctttaaaacg
ccaatgggctgccgtagcttcctcggcgtgtatgaggaggagggtcaacaaatccacgat
ggccggaataatttgggagtgatcagccttaatctgccacgtatcgcgttggaagcaaaa
ggggatgaaaaccaattttggcagttgctggatgagcgcctgcttatcgcgaaaaaagcg
ctaatgacccgaattgcccgtttagaagggatcaaagcacgagtcgcccccattctgtat
atggaaggtgcttgcggtgtacgcttacaagcggatgataatattgccgaaatctttaaa
aatggccgtgcgtcgatctcgctgggctatatcgggatacatgaaaccattaatgcctta
ttcggccatcagacccatctctttgatgaccagaagctgcgcgaaaaagccatcgccatt
gtggctcatttgaaacaggctaccgatgattggaaagatgaaaccggttatgcctttagc
ctatacagcaccccaagtgaaaacttgtgtgaccgcttctgccgccttgataccgctgaa
tttggcgtggttgaaggggtgacggacaaaggctattacaccaacagcttccatctggat
gttgagaaaaaagtgaatccctacgacaaactggatttcgaagccccttatccgccgctg
gctaacggtggtttcatctgttacggcgaataccctaatttgcagcacaacatccgggcg
ctggaagacgtctgggattacagctacagccgggttccttattacggcaccaacacgcca
attgatgagtgctatgaatgcggcttcaccggtgaattctcttgtaccagcaaaggcttt
acctgcccgaaatgcggcaaccatgagccatcgaaagtgtcggtcacccgccgggtatgt
ggttatctgggtagcccagatgcacggccatttaatgcgggtaaacaagaagaggtgaaa
cgccgggtgaaacatctggctaacgggcagttgggctga
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