Yersinia pseudotuberculosis IP 31758 (serotype O 1b): YpsIP31758_4150
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Entry
YpsIP31758_4150 CDS
T00570
Symbol
gyrB
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ypi
Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
Brite
KEGG Orthology (KO) [BR:
ypi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypi03032
]
YpsIP31758_4150 (gyrB)
03400 DNA repair and recombination proteins [BR:
ypi03400
]
YpsIP31758_4150 (gyrB)
Enzymes [BR:
ypi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
YpsIP31758_4150 (gyrB)
DNA replication proteins [BR:
ypi03032
]
Prokaryotic type
DNA Topoisomerases
YpsIP31758_4150 (gyrB)
DNA repair and recombination proteins [BR:
ypi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
YpsIP31758_4150 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
DUF6865
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ABS46699
UniProt:
A0A0U1QVZ0
LinkDB
All DBs
Position
complement(4684094..4686508)
Genome browser
AA seq
804 aa
AA seq
DB search
MSNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIL
VTIHADNSVSVQDDGRGIPTGMHDEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELVIRREGKVHEQTYKMGVPQAPLKVVGETEQTGTTVRFWPSFQTFTNNT
EFQYEILAKRLRELSFLNSGVSIKLKDKRNDKEDHFHYEGGIKAFVEYLNKNKNPIHPKV
FYFSTMKDDIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLVGFRTAMTRTLNSYMDKE
GYSKKAKISATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVETLMNEKLVEY
LLENPTDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVFIAQPPLYKVKKG
KQEQYIKDDDAMEQYQMTLALDGAALHTNAHAPALAGEPLEKLVAEHYSVQKTIARMERR
YPRALLNNLIYQPTLQEEDLGNKEVVTQWIDSLVVLLNEKEHHGSSYSSVVRENRERQLF
EPILRIRTHGVDTDYDLDFDFIHGGEYRKICLLGDKLRGLIEDGAFVERGERRVPVSSFE
EALDWLVKESRRGLAIQRYKGLGEMNPDQLWETTMDPESRRMLRVMVKDAIAADQLFTTL
MGDAVEPRRAFIEENALRAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatacttatgactcctcaagtatcaaggtattaaaagggctggatgccgtgcgt
aagcgtccgggcatgtatatcggagatactgatgatggtaccggtctgcaccacatggta
ttcgaggttgtggacaacgctattgacgaagccctcgcgggtcattgtaaagaaattctg
gtaaccatccacgcggataactccgtttctgtacaggatgatggccgtggtatcccaacc
ggtatgcacgatgaggaaggggtatctgcagcagaggtcatcatgaccgtgttgcatgct
ggcggtaaatttgacgataactcctataaagtttccggcggtttgcatggcgtaggggta
tccgttgttaacgccctgtctgaaaagttggaactggttattcgccgtgaaggtaaagtt
cacgagcaaacctacaaaatgggcgtgccacaggcaccgctgaaagtggtgggtgaaact
gagcaaaccgggaccactgtgcgtttctggccaagtttccagacctttaccaataacacc
gaattccagtatgagatcctggctaaacgcctgcgcgaactctctttcctgaactcgggt
gtttcaatcaaactgaaagacaaacgtaacgataaagaagaccacttccattacgaaggt
ggtatcaaggcgtttgttgaatatctgaacaaaaacaagaacccgatccacccgaaagtg
ttctacttctccaccatgaaagacgatatcggggtggaagtggcgctacagtggaacgat
ggtttccaggaaaatatttactgcttcaccaataacattccacagcgtgatggtggtacc
catttagttggtttccgtacggcgatgacccgtaccctgaacagctatatggataaagaa
ggctacagcaaaaaagcgaagatcagcgccaccggtgatgacgcccgtgaaggcttgatt
gctgttgtctcagtgaaagtgcccgatcctaaattctcctcacagaccaaagataaattg
gtttcttctgaggtgaaaacggcggtcgaaacgctgatgaacgagaagttggttgagtat
ttgttggaaaacccaactgacgccaaaatcgttgtgggtaaaatcattgatgcggcccgc
gcccgtgaagctgcgcgtaaagcccgtgaaatgacacgccgtaaaggcgcgctcgatctg
gcgggtttacccggcaaactggcagactgtcaggaacgtgacccggcattgtccgaactc
tacttagtggaaggggactctgcgggcggctcggctaaacaaggccgtaaccgtaaaaat
caggccattttgccgctgaaaggtaaaatcctgaacgttgagaaagcgcgttttgacaaa
atgctctcttcacaggaagtggcgacactgatcaccgcgttaggttgtggtattggccgg
gatgaatataacccggataaattgcgttatcacaatatcattatcatgaccgatgccgac
gtggatggctcgcacatccgtacgttgttgttgaccttcttctaccgtcagatgccggaa
attattgagcgtggtcatgtgtttatcgctcagcctccgctgtataaagtgaagaaaggt
aagcaagagcagtacatcaaagatgatgatgcgatggagcagtaccaaatgacactggct
ctggatggcgcggcattgcataccaatgctcacgcaccagcactggctggtgagcctttg
gagaaactggttgctgagcattacagcgtccagaagactatcgcccgcatggaacgccgt
tatccgcgtgctttgctgaataacctgatttatcagcctaccttgcaagaagaggatttg
ggcaataaagaggttgtgacgcaatggattgattcgctggtggtcttgctgaacgaaaaa
gaacaccatggcagcagctacagttcagtggtgcgtgagaaccgtgagcgtcaactgttc
gagcctattttgcgtattcgtacccacggggttgataccgattatgatctggacttcgat
tttatccatggtggcgagtaccgtaaaatctgtctattgggtgacaaactgcgtggctta
atcgaagacggtgctttcgttgaacgtggcgagcgtcgtgtgccggtttcaagcttcgaa
gaggcgctggactggttagtgaaagagtcccgccgtggtttggcaatccagcgttacaaa
ggcttgggtgaaatgaaccccgatcagttgtgggaaaccacgatggatccagagagccgt
cgtatgctgcgagtcatggtgaaagatgccatcgccgccgatcaactcttcactactctg
atgggtgatgctgttgaacctcgtcgtgcctttatcgaagagaatgcactgcgcgcagcc
aatattgatatctaa
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