Yersinia pseudotuberculosis IP 31758 (serotype O 1b): YpsIP31758_B0063
Help
Entry
YpsIP31758_B0063 CDS
T00570
Name
(GenBank) conserved domain protein
KO
K20332
toxoflavin biosynthesis protein ToxC
Organism
ypi
Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
Pathway
ypi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ypi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YpsIP31758_B0063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IP5PC_F
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Vps16_N
BBS2_Mid
eIF2A
Beta-prop_WDR75_2nd
Beta-prop_Vps41
SSL_N
Motif
Other DBs
NCBI-ProteinID:
ABS45678
UniProt:
A0A0U1QTG9
LinkDB
All DBs
Position
plasmid_153kb:66487..68148
Genome browser
AA seq
553 aa
AA seq
DB search
MYKHMSPISGIATAQGKWVLTAGYDNRVILWNAVTRQPVDRVFHDHLVNQCAFSPCGKFI
ATVSSDYSCRIWSLPNMSLQGIINGHSDDVESIAFHPIKPWVATCSRDKTILVSDFNGQS
ITQLKGHNADVISIEWNNTGQLISSSDDGTIRIWDAEKGCEVECIDLDNVETDTIAITPD
GVIYAGNDNGEIISIFQGNLTVTKAHEAGIKRLVYDNQQQVMVSLSYDRKMKLWRLYDGM
LENYHTAELPAIVWPRSCAFLNEDNLVFASFGDSYAQYSISTHQWHLEHIKPTQGLNACL
EIDGGVWSVGDAGTVYCDNSVVAEMGSLCNFLIEFKGMIVTGGQMGKLFDARTGEVIYQH
HSPLNCAAVSNSICVVGAYTGEGIVLGLVDGRVQVMDVISLHANAIKGVALSDSLIFSVC
ADASAAIHRIADRVLHAYIPQAHQKIANGCDGDGKGRFFSISRDLKLRLWQGESYTVIDT
PSTNSIKCVAYNSEKQWIAIGNYVGWVGIYDLACGEWIMWQRRSFSGISSIKTTRDNFIF
STYEGLSEYALHA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtataagcacatgtcgccaataagtggaatcgcaacggctcaaggaaaatgggtatta
actgcggggtatgacaatcgcgttattttatggaatgccgttacacggcagcctgtagat
agagtattccacgaccatttggtgaaccaatgtgctttcagtccatgcgggaaatttatt
gctacagtgagtagtgattacagttgtcgtatctggtcactgcctaatatgtcgttgcag
ggaattattaatggccatagcgacgatgttgagtccattgctttccatccaataaaacct
tgggtagcaacttgctcgcgagacaagactattttggtctctgattttaacgggcaatcg
ataactcagttaaagggccacaatgctgatgtgatctctatagagtggaataatactggg
cagctcatcagctcaagtgatgatggaactattcgtatttgggatgcagaaaaaggctgt
gaagtggaatgtattgatctcgataatgttgagacagatacaattgcaattacacccgat
ggtgtcatctacgcaggcaacgataacggtgagatcatatccatatttcaaggaaacctt
accgtaacaaaagcacatgaagctgggataaagcgtctagtttatgacaaccagcaacag
gtcatggttagtttgagctatgaccgcaaaatgaaactctggcgtctgtacgatggaatg
cttgagaactatcacactgctgaactgccagcaatcgtgtggccacgttcttgtgcattt
ctgaatgaggataatctcgtcttcgcttcgtttggcgacagttatgctcagtattcaatc
tcaactcatcaatggcatttagaacatatcaaacctactcagggactaaatgcatgttta
gaaatcgatgggggagtttggagtgtgggagatgctggaaccgtttattgcgataatagc
gtcgtagcggaaatgggtagcctttgtaatttcctcatagaatttaaagggatgatcgtg
acgggcggccagatggggaaactgtttgatgcccgtactggagaggtaatttaccagcac
cattcaccgcttaactgtgcagcagtttctaacagtatctgtgtagtaggtgcatataca
ggtgaaggtatcgtcttgggccttgttgatggcagagttcaagtgatggatgtcatcagc
ttgcatgctaatgcaattaaaggggtggcgttgtccgattcactgattttctctgtgtgt
gcggatgcttcagcagctattcacagaattgctgaccgtgtattacatgcttatattcct
caagcacatcagaaaattgccaatggatgtgatggcgatggtaaaggacgcttcttcagt
ataagccgcgacttgaagctgcgtctttggcagggtgaaagttatacagtcattgatacc
ccaagcactaattcaatcaaatgcgtggcatataactccgaaaaacaatggatcgcgatt
ggtaactatgttggttgggtcggtatctatgatttagcctgtggtgaatggatcatgtgg
caacggcgttctttctccggtatctcaagtattaaaactacacgggataattttattttc
tcaacctacgaagggttgagcgaatatgccttgcatgcttga
DBGET
integrated database retrieval system
