Yersinia pestis Harbin35: CH55_109
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Entry
CH55_109 CDS
T03717
Name
(GenBank) periplasmic binding domain protein
KO
K10439
ribose transport system substrate-binding protein
Organism
ypj
Yersinia pestis Harbin35
Pathway
ypj02010
ABC transporters
ypj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ypj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CH55_109
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
CH55_109
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ypj02000
]
CH55_109
Transporters [BR:
ypj02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
CH55_109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
SBP_bac_11
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AJK06939
UniProt:
A0A3G5L4X6
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All DBs
Position
120330..121247
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AA seq
305 aa
AA seq
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MFSFFKKALSFSIAGVMLFASQSVMAKQIVIGVSFQELNNDYFVSMKEALEQAANDIGAK
VYIADAGHDVSKQINDVEDMLQKKIDILLINPTDSVGVQSAVMAANKAGAVVVAVDAQAE
GPLDSFVGSKNYDAGFLAGEYLAKSLGGKGKVAILDGIPVVPILERVRGFEDAIKKYPDI
KIVTKQNGKQKRDTALTVTENMLQSVPDLAGIFSVNDVGALGALAAIESNGAKVKLVSVD
GQPEAIKEILKPNSPFIATSAQFPRDQIRIALGIALARYWGANVPATIPVEVKLIDSSNA
QGFSW
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgttttcatttttcaaaaaagccctgtcatttagcattgcaggcgtcatgctgtttgcc
agccaaagtgtcatggctaagcaaattgttattggtgtttcatttcaagaattaaataac
gactattttgtttcgatgaaagaggcattagaacaggcggccaatgatattggtgccaaa
gtatatatcgctgatgcgggtcatgatgtctcaaaacagattaatgacgtcgaagacatg
ttgcaaaagaaaatcgatattctgcttattaacccaacggattccgttggcgttcaatcg
gcggttatggcggcgaataaagcgggtgcggttgtggtggccgttgatgcacaagcagaa
ggtccgctggactctttcgtgggttcaaagaactatgatgcaggctttttagccggtgag
tatctggcgaaatcactgggggggaaagggaaggtcgcgatcctggatggcatccccgta
gtgccaattcttgagcgtgtacggggttttgaagatgcgataaaaaaatatccagacatc
aaaattgtcaccaaacaaaacggcaagcagaagcgtgatacggccttgacggtaaccgaa
aatatgttgcagtcggtccctgatctggccgggattttcagtgtgaatgatgttggtgca
ttgggtgcactggcagcaatcgaaagtaatggcgcaaaagtaaagctggttagcgtagac
ggccaaccagaagccattaaagagatcctgaaacccaattcaccttttattgcgacttcc
gcacagtttcctcgtgaccaaatacgtattgcactgggtatcgcgttggcccgttattgg
ggagccaatgttccggcaactattccggtcgaagtgaaactgatcgacagtagcaatgcg
caaggttttagctggtaa
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