Yersinia pestis Harbin35: CH55_1402
Help
Entry
CH55_1402 CDS
T03717
Name
(GenBank) outer membrane autotransporter barrel domain protein
Organism
ypj
Yersinia pestis Harbin35
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Pertactin
AIDA
NtrZ
Motif
Other DBs
NCBI-ProteinID:
AJK09989
LinkDB
All DBs
Position
1513364..1517011
Genome browser
AA seq
1215 aa
AA seq
DB search
MTDTTKVQGEKAVTLATKITDAKVAQEKKDANTEALAEIDGRLISVSNALIQATGTDKGP
LDQKLKEAQQAKTEQDGKELASGGYKELFEEDKKTSGYFGIAENDNGSGQQEKLAEAKKN
RDAYNKAAKKELDAIAKAQKAVEAIDAQIVKLKKDKGDIEQEQSTEKGKTGGLDIALSGA
NDAKDAAQGEFDTAKNAAELAETAAKAIEAAKITDKAVEDATAAYKEAADKAEQTKTALE
AAEKAKEDADKLVVTNTGLLNDADQALEQLVTAQNNAQPTLDLPAIDVTIAPAKTQDVIE
GTSAIATQVAGGTQNVAKGGKAIDSVITKDGIVNLAAGANAKGTEVTKGTLNNNGGVDTD
TVVSTEGKLVLTGGSETAIATSTGAKVAEGGVVTAGDHSVIEKMISSGNVTASGNNTIVR
DTTINDGKLSLAGTATANNTTFNGGIFSVEGDTAATKTNMTGGKFAVTGNAKIEETVVSA
GDVSLADKATANNTTLTGGTFAAAGDTAVSATNMTGGTFTVAGDTAATKTKMTGGEFAVT
GNAKIEDTVLNASDFSLADKATANNTTLTDGTFTVAGDAAVTATNMSGGKFAVKGKAKIK
DTQLSAGNFTLAENATANDTTLNGGKFDVSNEATATNTTINNGLFTLKDGAHADSTTVNS
GTFVMADQSTANGIQLVDSAFTLASGAKASGITKLTGGQAQVAGSLESLSLTGGRADFAN
SAKASGLLDISADSQIIMNRGADTAQANLNLAGRLELLASDVAQAVAQPVARAAMELSNA
RAVMPAPAMPVPAAAPVAHFALNDVVMTGGTVDMSNAKNAQLTMASLNGTGNFNLGSVMQ
SDSVAPLNVSGDANGDFIIAMNSSGQAPTNLNVVNTNGGDARFALANGPVALGNYMTNLA
KDANGNFVLTADKSAMTPGTAGILAVANTTPVIFNAELSSIQQRLDKQSTETNQSGMWGS
YLNNNFAVKGRAANFDQKLNGMTLGGDKATALADGVLSVGGFASYSSSDIKTDYQSKGKV
DSHSFGAYAQYLANSGYYMNAVVKNNQFSQDVNITSINGSASGVSNFSGMGIALKAGKHF
NFNEAYVSPYVAMSAFSSGKSNISLSNGMEAQSSSTRSAMGTLGVNAGYRFVMNNGAELK
PYAIFAVDHEFAKNNQVTVNQEVFDNNLSGTRVNTGAGMNVNITPNLSVGSEVKLSSGKD
IKTPVTINLNVGYSF
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatacaacaaaagtacagggagaaaaagcagttactctggctacaaaaataact
gatgccaaagtcgcccaagaaaagaaagacgcgaatacagaggcgcttgcagaaatcgac
gggcggctcatttctgtctcaaacgctttaatacaagcgacaggtaccgataagggtccg
ttggatcagaaacttaaagaagctcaacaagctaaaaccgaacaagacggaaaagaactg
gcgtccggcgggtataaagaactcttcgaggaggataagaaaactagcggttactttggc
attgcggaaaatgacaacggctcgggacagcaagaaaaattagccgaagcaaaaaagaat
cgagatgcctataacaaagcagctaaaaaagaacttgacgctatcgccaaggcccaaaaa
gcagttgaggctattgatgcacagatagtaaaattaaaaaaagataaaggtgatatcgaa
caagaacaaagtaccgaaaagggcaaaacaggtggtttagatattgcgctcagcggtgct
aacgacgctaaagacgcagcacagggtgaattcgacacggcaaaaaacgcagctgaatta
gctgaaacagcagcaaaggctatcgaagcagcaaaaatcaccgataaggcagttgaggat
gcaacagcagcttataaagaagccgcagacaaagcggaacaaactaaaacagcccttgaa
gcggctgaaaaagctaaagaagacgctgataaactcgtagtcactaacactggcctattg
aatgacgctgaccaagcacttgagcagttagtgaccgcccaaaataacgcccaacctaca
cttgatctgccagccattgatgtgaccattgcgcctgccaagacacaagatgtgattgag
ggcaccagcgccattgccacccaagtggccggtggcacacaaaatgttgccaagggcggt
aaagcgattgatagcgttattaccaaagacggtattgtaaaccttgctgctggtgccaat
gccaaagggaccgaggttactaaaggtaccctgaacaacaacggcggggttgataccgat
actgttgtcagtactgaaggtaaattggttctgacgggtggtagcgaaacggccatcgca
acctcaaccggtgccaaggttgctgaaggtggtgtagtgaccgcaggtgaccattccgtt
atcgaaaaaatgatcagtagcggtaacgtgaccgccagcggcaataataccatcgtgcgt
gatacgaccattaatgacggtaaattaagcctggcaggcaccgcaaccgccaataacacc
acgttcaacggcggtattttcagcgttgaaggtgataccgctgccaccaagactaacatg
actggcggtaaatttgcggttacaggcaatgccaagatcgaagagacggtagtcagcgcg
ggtgacgtctcgctggctgacaaagccaccgcgaacaacaccaccctgactggcggtact
tttgccgctgcaggcgataccgcggtgagcgcaactaacatgactggcggtacctttacc
gttgcaggtgataccgctgccaccaagactaagatgactggtggtgaatttgctgttaca
ggcaatgccaagattgaagacaccgtactcaacgcaagtgacttctcgctggctgacaaa
gccaccgcgaacaacaccaccctgactgacggtactttcaccgttgcaggtgatgccgcg
gtcaccgcgacgaacatgagtggcggtaaatttgcggttaaaggcaaagccaagatcaaa
gacacccaactcagtgcaggtaatttcactctggctgaaaatgccacagcgaatgacacc
acactgaatggcggtaaatttgacgtttcgaacgaggctacagcgactaacaccaccatt
aataacggcctgtttacgctgaaagatggcgctcacgcggacagcaccacagtcaatagc
ggcaccttcgtcatggccgatcaatctacggccaacggcatccaactggtagacagcgcc
ttcacactcgcaagcggtgctaaagcctccggtatcaccaaattaactggcggtcaggca
caggtagccggttcactggaaagcttgagccttaccggtggccgcgcagactttgccaac
agcgccaaagcctctggcctgcttgatatcagcgctgatagccagatcataatgaaccgc
ggtgcagataccgcacaagcgaacctgaacctggctggccgccttgaattgctcgccagt
gatgttgctcaagcagtggctcagccagttgcccgtgcggccatggagttatcaaatgcg
cgtgcggtaatgccagcccctgcaatgccagtccctgccgccgcaccggttgcacacttc
gccctcaacgatgtggttatgaccgggggcactgtcgatatgagcaacgcgaaaaatgct
caactgaccatggcttcactgaatggtacagggaactttaacctcggttctgtcatgcaa
agcgattcggtcgcgccattaaatgtatccggtgacgcgaacggtgacttcatcattgca
atgaatagcagcggtcaagcaccaactaacctgaatgtggtaaataccaacggtggtgat
gcacgctttgccttagccaatggtccggttgctttaggtaactacatgactaacctggct
aaagatgccaacggtaactttgtcctgaccgcagataaatcggctatgacaccaggcact
gccggtattctggccgtggctaacaccacaccggttatctttaacgctgagttaagttct
attcaacagcgtttggataagcaaagcaccgaaaccaaccaaagcggcatgtggggcagc
tacctgaacaacaactttgcagtgaaaggccgcgccgctaacttcgatcagaagttgaac
gggatgacattgggtggcgataaagccactgcactggcagacggcgtgttgagcgttggt
ggtttcgccagctacagcagctctgatatcaaaacggattatcaaagcaaaggtaaagtg
gatagccattcattcggtgcctacgcacaatacctggctaacagcggttactacatgaac
gcggtagtgaagaataaccagtttagccaagacgttaacatcacctcaattaacggcagc
gccagcggtgtgtctaacttctcgggtatgggtatcgcactgaaagccggtaagcacttc
aacttcaatgaggcttacgtctcgccatacgttgcaatgagcgcctttagctcgggtaag
agcaacatctccttgtctaacggcatggaagcacagagcagcagcacccgctctgcgatg
ggtacccttggggtgaatgcaggttaccgcttcgtgatgaacaacggcgcagaactcaag
ccatacgctatcttcgcggtggatcatgagttcgcgaaaaacaaccaagtgacggtgaat
caggaagtgtttgacaataacttgagcgggacccgtgtgaacaccggcgccggcatgaac
gtcaacatcacccctaatctgtctgtcggttctgaagtgaagttgtccagcggtaaagat
atcaagacaccagtaaccattaatctgaacgtgggttacagcttctaa
DBGET
integrated database retrieval system
