Yersinia pestis Harbin35: CH55_1973
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Entry
CH55_1973 CDS
T03717
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
ypj
Yersinia pestis Harbin35
Pathway
ypj00550
Peptidoglycan biosynthesis
ypj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ypj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CH55_1973 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ypj01003
]
CH55_1973 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ypj01011
]
CH55_1973 (mrcB)
Enzymes [BR:
ypj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
CH55_1973 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CH55_1973 (mrcB)
Glycosyltransferases [BR:
ypj01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CH55_1973 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ypj01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
CH55_1973 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
PBP1_TM
UB2H
Transpeptidase
PBP1b_C
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
AJK07875
UniProt:
A0A5P8YCB4
LinkDB
All DBs
Position
complement(2117721..2120195)
Genome browser
AA seq
824 aa
AA seq
DB search
MSGDDREPIGRKGKKAQPKAAPKRPLRRRRDEDEYEEDYDEEQNDYDDEEEPMPRKVASR
PPRKKRRWLGLLIKLFLIGAVALAIYGVYLDSQIRSRIDGKVWQLPAAVYGRMVNLEPGM
SYSKKEMIALLEGMQYRQVSRMTRPGEFTVQNDSIDILRRPFDFPDGKEGQIRARLLFKN
DRLAQIQNLDNQRDFGLFRLDPKLITMLQSPNGEQRLFVPRAGFPDLLVDTLLATEDRHF
YEHDGVSPYSIARAVVANLTAGKAVQGGSTLTQQLVKNLFLTNERSLVRKLNEAYMALLM
DYRYSKDRILELYLNEVYLGQSGGDQIRGFPLGSLYYFGRPVDELSLDQQAMLVGMVKGA
SLYNPWRNPKLALERRNLVLRLLQNQGIIDAELYTMLSARPLGVQPKGGVITPQPAFMQM
VRQELQQKLGNKVNDLSGVKIFTTLDPVSQDAAEKAIEDGVPALRAARNMNDLEAAMVVV
DRFSGEVRAMVGGSQPQFAGFNRAMQARRLVGSLAKPPTYLAALSEPDKYRLNTWLSDQP
LSLKLSNGSLWQPKNYDRQFRGQVMLMDALVNSLNIPTVNLGMSVGLDQISATLQRLGIP
KSVINPVPAMLLGAIDLTPVEVAQEYQTIASGGNRAPLSAVRSVIAEDGTVLYQSFPQAE
RMVPAQASYLTLYAMQQGVVRGTSRSLSAKFGKYNLAAKTGTTNDLRDSWFAGIDGKEVT
IAWIGRDNNGPTKLTGASGALTLYRRYLENQTPLPLILQPPEGISQMNIDSAGNFVCGEG
SGMRVIPVWTENPQALCQGSTPTQDPTKPNDDGVADWIKEMFGQ
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggacgatcgtgagccgatagggcgcaagggcaagaaagcccaacccaaagca
gcaccaaaacgtccactgcgccgtcggcgtgatgaagatgaatacgaagaagattatgac
gaagaacaaaatgattatgatgacgaggaggaaccgatgccaagaaaagtagcatcacgc
ccacctcgcaagaaacgccgttggctcgggttgttgatcaaactgttcctgattggggcc
gtggctttggcgatctatggggtttacctcgattcgcaaatccgcagccgtattgatggc
aaagtctggcaattaccggctgccgtgtatggccgcatggtcaatcttgagccgggtatg
tcctacagcaaaaaagagatgatcgccttgctggaagggatgcaataccgtcaggtcagt
cgcatgacccgccctggggagttcacggttcagaacgacagtatcgatatcttgcgccgg
ccgttcgatttccctgatggtaaagaaggccaaattcgcgcccgtttactgttcaaaaat
gatcgtctggcccagattcaaaacctggataatcagcgtgatttcgggctattccgcctc
gatcccaagttgattaccatgctgcaatcacctaacggtgaacagcgtctgtttgttccg
cgcgccgggttccctgatttgctggtggacaccttgctggcgactgaagaccgccatttc
tatgagcatgatggcgtcagcccgtattccattgctcgagccgtggtcgctaacctgaca
gccggtaaagcggtgcaggggggcagtacgctgacgcaacagttagtgaaaaacctgttc
ctgaccaatgaacgttcgctggtacgtaaacttaacgaggcctatatggccctgttgatg
gattatcgctacagcaaagatcggatcttggaactctatctgaacgaagtctatcttggt
cagagtggtggtgaccaaatccgtggcttcccgctgggtagcttgtattactttggccgc
ccggttgatgaattgagtctcgatcagcaagccatgttggttggcatggtgaaaggggcc
tcactgtataacccgtggcgtaatcctaagctggcacttgagcggcgtaatttggtcctg
cgcttgttgcagaatcaagggattatcgatgctgagctttacaccatgctcagtgcccgt
ccgctgggggtgcagccgaaaggcggagtcatcacacctcaacctgcttttatgcagatg
gtgcgccaggagctgcaacagaagttgggtaacaaggtcaatgatctgtctggcgtgaag
atcttcaccaccttggatccggtttcacaagatgccgcagaaaaagccatcgaagacggt
gttccggcgctgagagccgcccgtaatatgaatgacctggaagcggcgatggtggtggtt
gaccgtttcagtggcgaagtgcgtgccatggtgggcggttcacagccacaatttgccggt
tttaaccgtgcgatgcaggcccgccgtttggtggggtcacttgccaaaccaccaacctat
ctggccgcgttgagtgagccggataagtaccgcctcaatacctggctttcggaccaaccg
ctgtcgcttaaattgtcgaacggttcattgtggcagccgaaaaactatgatcgccagttc
cgtggtcaggtcatgttgatggatgcgttggtgaactcactgaacatcccaacagtcaat
ttggggatgtcagtgggcttagatcagatcagcgccacactgcaacgccttgggatcccg
aaatcagtcattaatccggtcccagccatgttattgggggcgattgacctgactccggtt
gaagttgcgcaggagtatcagacaatcgccagtggtggcaaccgtgcaccgttgtcggct
gtgcgttcggttattgctgaggatgggaccgtgctgtatcagagcttcccacaggcagaa
cgtatggtgcctgcacaagcttcttacctgacgctgtatgcgatgcagcaaggggttgtc
cgtggtacatcacgctctctctcggcgaagttcggcaaatataatctggcggccaaaacc
gggacaaccaacgatctgcgtgacagttggtttgccggtattgatggcaaagaagtgacc
attgcctggattgggcgcgacaataacggcccgactaagctgaccggggccagcggcgcg
ctaaccttgtatcgccgctatctggaaaaccaaacgccgttgccgctgattctgcaaccg
ccagaaggcattagccaaatgaacattgattcggcggggaacttcgtctgtggtgaaggg
agcgggatgcgcgtcattcctgtttggaccgaaaatccgcaagctttgtgtcagggatca
acacccactcaagaccccacaaaacctaacgatgatggtgttgccgattggatcaaagag
atgtttggccaataa
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