Yersinia pestis Harbin35: CH55_1979
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Entry
CH55_1979 CDS
T03717
Symbol
pcnB
Name
(GenBank) poly(A) polymerase family protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ypj
Yersinia pestis Harbin35
Pathway
ypj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ypj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CH55_1979 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ypj03019
]
CH55_1979 (pcnB)
Enzymes [BR:
ypj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CH55_1979 (pcnB)
Messenger RNA biogenesis [BR:
ypj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CH55_1979 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AJK08485
UniProt:
Q0WBP7
LinkDB
All DBs
Position
2126442..2127764
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AA seq
440 aa
AA seq
DB search
MAIIPRDQHNISRRDISDNALKVLYRLNKSGYEAYLVGGGVRDLLLGRKPKDFDITTSAT
PEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEQQQAEDSDKNSSQQAQNGML
LRDNIFGSIEDDAQRRDFTINSLYYGISDFALRDYTGGLRDLKEGIIRLIGDPETRYRED
PVRMLRAVRFAAKLDMSISPETAEPIPRLASLLREIPPARLFEESLKLLQSGYGYKTYLK
LCEYQLFQPLFPLIARNFTEQHDSPMERILVQVLKNTDHRLHNDQRVNPAFLFAAMLWYP
LIEHAQKLTQESGLAYYDAFALAMNDVLDEECRSLAIPKRITSLVRDIWLLQLRLSRRQG
KRAHKLMEHPKFRAAYDLLLLRAEVEKNHELQRLAQWWGEFQEATPTQQKSMLNTLGADP
APRRSRPRRPRKPVPRKEGV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgattattccgcgggatcagcacaatatctcccgcagagatatcagtgacaatgca
ctgaaggttctctatcgcctgaataaatcaggttacgaagcttatctggtgggcggcggt
gtccgcgacctgctgctgggcagaaaacccaaagatttcgatatcaccaccagcgccacc
cctgaacaggtgcgaaaactgttccgtaactgtcgtttggttggccgccgcttccgtttg
gctcatgtgatgtttggccctgaaattattgaagtagcgactttccgtggccaccacgag
cagcaacaagcagaagacagcgataagaactcctcccagcaggcgcaaaatggcatgttg
ctgcgtgacaacatctttggctccatcgaagatgatgctcaacgccgtgatttcaccatt
aacagcctctactacggtatttctgattttgcgctgcgtgactacaccggcggcttacgt
gatctgaaagaaggtattattcgtctaattggcgacccagaaacccgttaccgtgaagat
ccggtacggatgctgcgtgcggttcgttttgccgcaaaactggatatgtcaatcagcccg
gaaacggcagagcctataccgcgtctggcctcactgttgcgcgaaatcccgcccgcccgc
ctgtttgaggagtcactcaagctgctgcaatccggctacggctataaaacctatttaaaa
ctgtgcgaataccagcttttccagccgctattcccactgattgcccgtaattttactgaa
cagcatgattcgccaatggagcgtattctggttcaggtactgaaaaataccgaccaccgt
ctgcataatgatcagcgggttaatcctgccttcttatttgcggcgatgctgtggtatccg
ctgattgaacatgcgcagaagttaacgcaggaaagcggcttggcctattacgatgcattt
gcattggccatgaatgatgtactggacgaagagtgtcgctcactggcgatccctaaacgt
atcacctcactggtacgggatatctggttgttacaactgcgtctgtcacgtcgtcagggg
aaacgtgcccataagctgatggaacaccctaaattccgggcggcttacgatctgttactc
ctacgggcagaagtggaaaaaaatcacgagctgcaacgtttggcgcagtggtggggcgaa
ttccaggaagccactcccacgcaacagaaatccatgctgaatacattaggtgctgatcct
gcgccacggcgttcacgtccacgccgcccacgcaagccagtaccccgtaaagaaggggta
taa
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