Yersinia pestis Harbin35: CH55_2382
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Entry
CH55_2382 CDS
T03717
Symbol
holD
Name
(GenBank) DNA polymerase III subunit psi
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
ypj
Yersinia pestis Harbin35
Pathway
ypj03030
DNA replication
ypj03430
Mismatch repair
ypj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CH55_2382 (holD)
03430 Mismatch repair
CH55_2382 (holD)
03440 Homologous recombination
CH55_2382 (holD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypj03032
]
CH55_2382 (holD)
03400 DNA repair and recombination proteins [BR:
ypj03400
]
CH55_2382 (holD)
Enzymes [BR:
ypj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CH55_2382 (holD)
DNA replication proteins [BR:
ypj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CH55_2382 (holD)
DNA repair and recombination proteins [BR:
ypj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CH55_2382 (holD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_III_psi
Phage_TAC_6
CSTF_C
Motif
Other DBs
NCBI-ProteinID:
AJK07090
UniProt:
A0AAX2I3Y5
LinkDB
All DBs
Position
complement(2573373..2573810)
Genome browser
AA seq
145 aa
AA seq
DB search
MASRRDLLLQQLGITQWVLRRPAVLQGEIAIHLPEDTRLLIVAQQLPEHGDPLLCDVLRS
LGLTPHQVYALTPDQVAMLPEDTQCNSWRLGISEPLAVAGAQLHSPELAGLYQDAGAKRA
LWQQICHYEADFYPDASRSGHSIPN
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagacgagacttgctgttacagcagcttggcattacgcagtgggtattgcgc
cgtcctgccgtcttgcagggtgagattgcaatacatttacctgaagatacccgcctactg
attgtggcacagcaactgcctgaacacggtgatccactgttgtgcgatgtgctacgcagt
ttgggcctaaccccccatcaggtttatgccttgacgccggatcaggtcgcgatgttgccg
gaagatacgcagtgcaacagttggcgattgggcatcagtgagccgcttgcggtggccggt
gcacaattacatagcccagaattagctgggctttatcaagatgcgggcgctaagcgcgca
ctttggcagcagatttgtcattatgaagcagatttctatcctgacgccagccgatctggc
cacagcataccaaattga
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