Yersinia pestis Harbin35: CH55_2778
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Entry
CH55_2778 CDS
T03717
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
ypj
Yersinia pestis Harbin35
Pathway
ypj03030
DNA replication
ypj03430
Mismatch repair
ypj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CH55_2778 (dnaN)
03430 Mismatch repair
CH55_2778 (dnaN)
03440 Homologous recombination
CH55_2778 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypj03032
]
CH55_2778 (dnaN)
03400 DNA repair and recombination proteins [BR:
ypj03400
]
CH55_2778 (dnaN)
Enzymes [BR:
ypj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CH55_2778 (dnaN)
DNA replication proteins [BR:
ypj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CH55_2778 (dnaN)
DNA repair and recombination proteins [BR:
ypj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CH55_2778 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AJK07251
UniProt:
A0AAX2HV76
LinkDB
All DBs
Position
complement(3034268..3035368)
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AA seq
366 aa
AA seq
DB search
MKFIIEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGSLRLTGTDLEMEMVACVALS
QSHEPGATTVPARKFFDIWRGLPEGAEITVALDGDRLLVRSGRSRFSLSTLPAIDFPNLD
DWQSEVEFTLPQATLKRLIESTQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVC
SMPIGQTLPSHSVIVPRKGVMELVRLLDGGDTPLRLQIGSNNIRAHVGDFIFTSKLVDGR
FPDYRRVLPKNPDKMLEAGCDLLKQAFSRAAILSNEKFRGVRLYVSHNQLKITANNPEQE
EAEEILDVSYEGTEMEIGFNVSYVLDVLNALKCEDVRLLLTDSVSSVQIEDSASQAAAYV
VMPMRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatcattgaacgtgagcatctgctaaaaccactgcaacaggtcagtagcccg
ctgggtggacgccctacgttgcctattttgggtaacttgttgctgcaagtcacggaaggc
tctttgcggctgaccggtaccgacttggagatggagatggtggcttgtgttgccttgtct
cagtcccatgagccgggtgctaccacagtacccgcacggaagttttttgatatctggcgt
ggtttacccgaaggggcggaaattacggtagcgttggatggtgatcgcctgctagtgcgc
tctggtcgcagccgtttctcgctgtctaccttgcctgcgattgacttccctaatctggat
gactggcagagtgaggttgaattcactttaccgcaggctacgttaaagcgtctgattgag
tccactcagttttcgatggcccatcaggatgtccgttattatttgaacggcatgctgttt
gagaccgaaggcgaagagttacgtactgtggcgaccgatgggcatcgcttggctgtatgc
tcaatgcctattggccagacgttaccctcacattcggtgatcgtgccgcgtaaaggtgtg
atggagctggttcggttgctggatggtggtgatacccccttgcggctgcaaattggcagt
aataatattcgtgctcatgtgggcgattttattttcacatctaagctggttgatggccgt
ttcccggattatcgccgcgtattgccgaagaatcctgataaaatgctggaagccggttgc
gatttactgaaacaggcattttcgcgtgcggcaattctgtcaaatgagaagttccgtggt
gttcggctctatgtcagccacaatcaactcaaaatcactgctaataatcctgaacaggaa
gaagcagaagagatcctcgatgttagctacgaggggacagaaatggagatcggtttcaac
gtcagctatgtgcttgatgtgctaaatgcactgaagtgcgaagatgtgcgcctgttattg
actgactctgtatccagtgtgcagattgaagacagcgccagccaagctgcagcctatgtc
gtcatgccaatgcgtttgtag
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