Yersinia pestis Harbin35: CH55_3360
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Entry
CH55_3360 CDS
T03717
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
ypj
Yersinia pestis Harbin35
Brite
KEGG Orthology (KO) [BR:
ypj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ypj02000
]
CH55_3360
Transporters [BR:
ypj02000
]
Other transporters
Pores ion channels [TC:
1
]
CH55_3360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
DUF945
Motif
Other DBs
NCBI-ProteinID:
AJK09329
LinkDB
All DBs
Position
complement(3646516..3650139)
Genome browser
AA seq
1207 aa
AA seq
DB search
MKWVKRLSIAFLLIILLLVGALGGLLGTTSGLHFLINSAARWVPGLDIASVSGGWRGLTL
TGIQYQMPGVTVKAGQFYLSLQLSCLKNSELCVNALTAQDIDVVVNTQAMPPTSSTPAST
DPMGELSTPYPIFLRLLSLNNVKVTIDDTAISLDEFRTGAHWKQRSLALMPTKINGLLIA
LPKTVSAGVPDAVKPAVETAMAAKEAVAQLSAAPGRSATASGQSTTASGRSATASGQSAT
TGGQLATVPAEPATPLGESLKALFAKPLLPALPDFRLPLDLQIEEISGQQLRLTGDNEVL
ISSLLLQASTQDQRITLDTLEIKSPQGGLSAQGQATLADKWPLDLVVNSALNIDSLKGEK
VKLTVGGALREELKVTLNLSGPVSAQLETETSLAKAGLPLSLTLQSKQLRWPLTGEPQYQ
MNNLRMRLNGQATDYALSIRSDIKGTDLPPAVFTLEGKGNVEQFNLTRLRLAALQGHTDL
TGVVDWRQAISWNSVLTLSGINMAKQWPEWPAKLEGKIVTRGSIHGGSWQLQVPELVLDG
NVKQNRVTARGSLTGNAAGQWHIPGINLALGRNKLDMKGELNDNWLLDANVDAPQLDGAL
PGLGGVVKGSLKLRGNLKTPQLLADLTANRLQWQELHINRIKVDGDVRSTDQIQGQLAVR
VEQLKQADFVVSLLTLDARGSEKQHQLRLNMQGDPVSGQLSLEGSFDKQQQRWRGTLNNT
RFDTPVGEWRLSRAMTLDYQNSAQRITIGPHCWLNPNAELCAPRPIEAGPSGQASVVLNR
FDLAMIKPFLGPDTTMNGVFTGRAEVSWKEGGKLPDVRVSLSGNGVKVQQMVQGSPLPIA
FETLNLNGGLANGQVRADWLVKLVNNGQFSGQVQVADPEGRRNLSGNVAISNLSLAMINP
ILSDGEKAAGILNANLRLAGNAKSPLVYGRLALDKVDIDGSWMPFDITEGRLAMNFDGMT
STLEGLIRTSQGQLNLSGDADWRDISAWHARIAAKGNKLRVTIPPTARVDVSPDIVFEAT
PQLFTLNGSVDIPWARITVQEVPETAVGVSSNEVMLNDQLQPIAPRSASIPISSNLVIRI
GNDVRLNAFGLKARLQGDLRMMQDQRGLGLNGQINIPSGSFRAYGQDLIVNKGILLFSGP
PDQPLLNIEAIRNPDSTANGVIAGVRVTGMADSPRMEVFSDPAMSQQEALSYLLRGQGLA
IRGLTAV
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgggtaaagagactcagtattgcattcttgctgattatcctgctattggtcggt
gctctgggggggttactcggtacgaccagtgggttacattttttaatcaacagcgccgcc
cgctgggtacctgggcttgatattgccagtgttagtggtggctggcgtggtctcacctta
acgggcattcagtatcaaatgcccggcgtcacggtcaaagctgggcaattttatctgtca
ttgcagctctcttgtctgaagaatagtgagctatgtgttaacgcactgacagcacaagat
attgatgtggtggtgaatactcaagcgatgccacctacgtcatccacgccagccagtact
gaccccatgggggaactgagtaccccatatcccattttcttacgtttgctgtcactgaat
aacgtcaaagtgaccattgatgatacggctatttcactggatgaattccgtactggtgcg
cattggaagcaacgttcattggctttgatgccgacaaaaatcaacgggttattgatcgca
ttacccaaaacggtgtcagccggggttcccgatgcggtgaagcctgcggttgaaactgct
atggccgccaaagaggcggttgcgcaattatcagcggctcctggacgatcagccactgca
tcagggcaatcaaccactgcgtcaggacgatcagctactgcgtcagggcaatcagccact
accgggggtcaactggctacggtcccagcagaaccggcgaccccactgggtgaaagttta
aaagcgctatttgccaaaccattgctaccggcattgccggacttccgtctaccgctggat
ttgcagattgaagagatctcagggcaacagcttaggctgaccggggataacgaggtcctt
atcagcagcttgttactgcaggccagtacacaagatcaacggataacactggatacgctg
gagatcaaatcgccgcagggcgggttgtcggcgcaggggcaagcgacattggcggataag
tggccgctggatctggtggtcaatagtgcgttgaacattgactcgctgaaaggcgaaaaa
gtgaaattgaccgtcggtggggcgctgcgtgaggaactcaaggtcacgctcaatctgtca
gggccggtcagtgcgcaactggagacagaaacgtcgctggcaaaggcaggtttgccgttg
tcgctgactctgcagagcaaacaactgcgctggccgttgactggcgagccccaataccaa
atgaataacctcaggatgcgcctcaatgggcaagcgacggattatgcgctttctatccgt
tctgatatcaaaggtactgatctaccgccagcggtattcacgctggagggtaaaggcaat
gttgagcaatttaatctgacgcgtttacgtctggcggcgttgcaaggtcacactgacctg
actggggtagtggattggcggcaagcgatcagttggaattcggtactcaccttatcgggc
atcaatatggccaaacagtggcctgaatggccagcaaaattggagggtaagattgttacc
cgcggcagtattcatggcggtagctggcaattgcaggttccggagctggtacttgatggc
aatgtgaaacagaatcgcgtgaccgcccgcgggtctctgaccggtaatgcggcgggccaa
tggcatattcctggtatcaatctggcgttgggccgtaataagcttgatatgaaaggggag
ttgaacgacaactggctgttggatgctaatgtcgatgcgccacaacttgatggcgcgttg
cccggtctgggtggtgtagtgaaagggtcgctgaaattacgcggtaacctgaaaacgccg
caactgctggctgatctcacggctaaccgcctgcaatggcaagagttgcacatcaatcgt
attaaagtggatggcgatgtccgttcgacagatcaaattcaaggccagttggcggtcaga
gttgaacagcttaagcaagctgattttgtggtcagtttgttgacgttggatgcccgtggc
agtgaaaaacagcatcagttgcgtctgaatatgcaaggggatcctgtctccggccaattg
tcgctggagggcagcttcgacaaacaacaacagcgttggcgcggtactctcaataacacg
cgctttgataccccagtgggggaatggcgtttaagccgtgcaatgacactggattatcag
aacagcgcgcaacggatcaccatcggcccccactgttggcttaatcccaatgctgagctt
tgtgcgccccggccaattgaagctggccccagtgggcaggcaagtgtggtactcaaccgc
tttgatttagcgatgatcaaaccgttcctcggcccggataccaccatgaacggtgtgttt
actggccgggcagaggtcagttggaaagagggcggtaagttacctgatgtgcgggtatca
ctcagtggtaatggcgtgaaagtacaacaaatggtgcagggcagcccactgccgattgcc
tttgaaaccctgaacctgaatggcgggctggcgaatgggcaagtgcgcgccgactggttg
gtcaagctcgtcaataacgggcagttctctgggcaggtgcaagttgcagacccagaaggg
cggcgcaacttatccggtaatgtagccataagtaatctctctctggcgatgattaacccg
attctgagtgatggtgaaaaagcggctggcatattgaatgcgaatctgcgtttggcaggg
aatgcgaaaagtccgctcgtctatggccgcctggcactggataaggtggatattgatggc
agttggatgccattcgatatcaccgaagggcgcttggcgatgaattttgatggcatgaca
tcgacgctggaggggttgatacggacttcccaagggcagttgaatctctccggcgatgcg
gactggcgtgatattagcgcctggcatgccagaattgcggccaagggcaacaagttacgg
gttacgatcccgccgacggcgcgagtcgatgtttcaccggatattgttttcgaagccacg
ccgcagttatttacgctcaatggttcggtcgatattccttgggcgcgcatcaccgtgcag
gaagtgcccgaaacagcggttggcgtctcctcgaatgaggttatgctcaatgaccaattg
cagcctattgcgccacggagcgccagtattccgatcagcagtaatttggtgattcggatc
ggtaacgatgttcgtttgaatgcatttggtttgaaagcccgcttgcagggcgatttgaga
atgatgcaggatcagcgtgggttagggctgaatgggcaaattaatattccgtccggtagc
ttccgcgcttatggtcaggacctcatcgtcaacaaaggaatattgctgttctctggccca
ccagatcagccgctacttaatattgaagcgatccgaaatcctgactctaccgctaatggt
gttattgccggagtacgtgttacggggatggcagattccccgcgcatggaggtattctct
gatccggcaatgtctcaacaggaggccttatcttatctgttgcgtggccagggcttggca
attcgggggctgacagcagtatga
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