Yersinia pestis Harbin35: CH55_3390
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Entry
CH55_3390 CDS
T03717
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
ypj
Yersinia pestis Harbin35
Pathway
ypj02024
Quorum sensing
ypj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ypj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CH55_3390 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CH55_3390 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ypj03019
]
CH55_3390 (hfq)
03036 Chromosome and associated proteins [BR:
ypj03036
]
CH55_3390 (hfq)
Messenger RNA biogenesis [BR:
ypj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CH55_3390 (hfq)
Chromosome and associated proteins [BR:
ypj03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CH55_3390 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AJK07871
LinkDB
All DBs
Position
complement(3679986..3680291)
Genome browser
AA seq
101 aa
AA seq
DB search
MAKGQSLQNPFLNALRRERVPVSIYLVNGIKLQGQVESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNTPSGSTNNYHGSNPSAPQQPQQDSDDAE
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttgcaaaatccgttcctgaacgcattgcgtcgtgaacgggtt
ccggtttctatttatttagtgaatggtattaaactgcagggccaagttgagtcttttgat
cagtttgtcattctgttaaaaaatacagtcagccagatggtttataagcacgccatctct
actgttgtgccttctcgtccggtttcgcatcacagcaatactccgagcggtagcaccaat
aattatcatggtagtaatccgtctgcgccgcaacagccgcagcaggacagtgatgacgct
gaataa
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