Yersinia pestis Harbin35: CH55_3834
Help
Entry
CH55_3834 CDS
T03717
Name
(GenBank) lysM domain protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ypj
Yersinia pestis Harbin35
Brite
KEGG Orthology (KO) [BR:
ypj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ypj01011
]
CH55_3834
Enzymes [BR:
ypj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CH55_3834
Peptidoglycan biosynthesis and degradation proteins [BR:
ypj01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CH55_3834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM_RLK
LysM3_LYK4_5
NMB0315_dom_I
LysM1_NFP_LYK
DUF3071
LysM_OapA
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AJK06362
LinkDB
All DBs
Position
complement(4197611..4198999)
Genome browser
AA seq
462 aa
AA seq
DB search
MKTKAILLASVLLVGCQTSKQDAQAPEQHAQSLSSAGQASEAGEYTNSTREGSARWLESE
SSYAQQDLWNFIKDELKMKVPENSRIREQKQKYLKNKSYLHDVTLRAEPYMYLIVEQIKK
RKMPMELVLLPIVESAFDPHATSSANAAGLWQIVPSTGRNYGLKQNQWYDGRRDVVASTK
AALDILERLNKMFNGDWLLTVAAYNSGEGRVMQAIKANKAKGKPTDFWALSLPRETSIYV
PKMLALGDLLKNSKKYGITLPETDKDRALARVDVDQQIELTQAAEMAGMSLTKLKSFNSG
YKRNVTAPDGHGPRYIMLPKAHAEQLKDSLADTDITAVQPTKLATNSTKSASSSQYKVRP
GDTLSTIAKRLNIKTSDLQSWNNLRAKSTLKVGQTLQLASNTTSKSITYQVRKGDSFASI
AKRHGVNTDDVMRWNSVVSKANNLQPGLKLTLFVNDKSTPEA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaaagcgatacttctcgcctcagtcttgcttgtcgggtgccagacgtccaag
caggacgcgcaggctcccgaacagcacgcacagagtttgtcttcggcaggtcaagcgagt
gaagcaggagagtacacaaatagcacccgagagggttcagcgcgctggctggaaagtgaa
agcagctacgcgcagcaagatttgtggaacttcatcaaagacgagctgaagatgaaggtt
ccggagaattcccggatccgtgaacaaaaacagaaatacttaaaaaataagagctatctc
cacgatgtaacattacgggcagagccgtacatgtacctgatagtcgagcagattaagaaa
cgtaagatgccgatggaactggtactgctacccatagtggagagcgcttttgacccacac
gcgacatcatccgccaatgccgcagggctatggcagattgtgccaagtacggggcgaaat
tatggcttgaagcaaaatcaatggtatgacggtcgcagagatgttgttgcctctaccaaa
gcagcgcttgatatattggaacgcttgaacaaaatgtttaacggtgactggttattgaca
gtcgcagcttataacagcggtgaaggccgagttatgcaagcgataaaagccaataaggca
aagggcaaaccgaccgatttttgggcattgtcgcttccgcgtgaaacgtcaatttatgtt
ccaaaaatgctggccttgggtgatttactcaagaacagcaaaaagtacggtataaccttg
cctgagactgacaaagaccgtgcgctggctcgcgttgatgtcgatcaacaaatagagcta
actcaggcagctgagatggcggggatgtcactgacaaagctgaaatcctttaattctggc
tacaaacgcaatgtaacggcaccggatggacatggtccccgttatattatgttaccgaaa
gcccatgctgagcagttgaaagactcattggcagatactgatattactgctgttcaacct
acaaaattggcaacgaacagtacaaaatcagcatcaagttcgcagtataaagttcgccca
ggcgataccttatctacgattgccaagcggttgaatatcaagaccagcgatttgcagagt
tggaacaacttacgtgccaagagcaccttaaaagttgggcaaaccctgcaactggcaagc
aatacaaccagcaaaagtatcacctatcaagttcgtaaaggtgattcctttgccagtatt
gccaagcgtcacggtgtaaataccgacgatgtgatgcgatggaattcggtagtcagcaaa
gctaacaatttacaaccaggcttgaaattgacgttattcgttaacgacaaatcaaccccg
gaggcgtag
DBGET
integrated database retrieval system
