Yersinia pestis Harbin35: CH55_3838
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Entry
CH55_3838 CDS
T03717
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ypj
Yersinia pestis Harbin35
Pathway
ypj03030
DNA replication
ypj03430
Mismatch repair
ypj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CH55_3838 (dnaQ)
03430 Mismatch repair
CH55_3838 (dnaQ)
03440 Homologous recombination
CH55_3838 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypj03032
]
CH55_3838 (dnaQ)
03400 DNA repair and recombination proteins [BR:
ypj03400
]
CH55_3838 (dnaQ)
Enzymes [BR:
ypj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CH55_3838 (dnaQ)
DNA replication proteins [BR:
ypj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CH55_3838 (dnaQ)
DNA repair and recombination proteins [BR:
ypj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CH55_3838 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AJK07468
UniProt:
A0AAX2I054
LinkDB
All DBs
Position
4201179..4201943
Genome browser
AA seq
254 aa
AA seq
DB search
MIITPTRQIVLDTETTGMNKLGVHYEGHRIIEIGAVEVINRRLTGRNFHVYVKPDRLVDP
EAYGVHGISDEFLADKPTFADITPEFLDFIRGAELVIHNAAFDIGFMDYEFRMLQQDIPK
TETFCTITDSLLMARRLFPGKRNNLDALCDRYQIDNTKRTLHGALLDAEILAEVYLAMTG
GQTSLTFSMEGEVSQNNASEDIQRITRPASALKIIYATEDELANHESRLDFVMKKGGSCL
WRMPLEAEEETKAE
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgatcattacaccgaccagacagattgttctggatactgaaactaccggtatgaataag
cttggcgttcattatgaaggccatcgtattattgaaatcggtgccgttgaagttatcaat
cgccgcctgaccggcagaaatttccatgtatatgtgaagcccgaccgtttggttgatcca
gaagcttacggggtgcacgggatcagcgatgagtttttggctgacaagccaacatttgct
gatattacgccggagtttttagattttatccgtggcgctgaattagtcatccataatgct
gcgtttgatatcggctttatggattacgagttccggatgttgcagcaagatattccgaaa
acggagaccttctgtactatcactgatagcctgttgatggctcgccgcttatttcccggt
aagcggaataaccttgatgccctgtgtgatcgctatcagatagataataccaaacgaacc
ttgcacggtgcgttacttgatgccgagattctggctgaagtttatttagcaatgactggc
gggcagacatcgctaactttctccatggaaggcgaagtgtcgcagaataacgcgtctgaa
gatattcaacgcattactcgcccagcatcggcattgaaaattatctatgctaccgaggat
gaattggctaatcatgaatcccgtttggattttgtgatgaaaaagggcggcagttgcctg
tggcggatgccgcttgaggcagaagaagagacaaaagcagaataa
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