Yersinia pestis Harbin35: CH55_661
Help
Entry
CH55_661 CDS
T03717
Name
(GenBank) AMP-binding enzyme family protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ypj
Yersinia pestis Harbin35
Pathway
ypj00061
Fatty acid biosynthesis
ypj00071
Fatty acid degradation
ypj01100
Metabolic pathways
ypj01212
Fatty acid metabolism
ypj02024
Quorum sensing
ypj04146
Peroxisome
Module
ypj_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ypj00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CH55_661
00071 Fatty acid degradation
CH55_661
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CH55_661
09145 Cellular community - prokaryotes
02024 Quorum sensing
CH55_661
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ypj01004
]
CH55_661
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ypj04147
]
CH55_661
Enzymes [BR:
ypj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CH55_661
Lipid biosynthesis proteins [BR:
ypj01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CH55_661
Exosome [BR:
ypj04147
]
Exosomal proteins
Exosomal proteins of breast milk
CH55_661
Exosomal proteins of breast cancer cells
CH55_661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AJK07381
LinkDB
All DBs
Position
complement(723802..725490)
Genome browser
AA seq
562 aa
AA seq
DB search
MEKVWLKRYPADVPAEIDPDRYSSLIEMFENAALRYADQPAFINMGEVMTFRKLEERSRA
FAAYLQQGLGLQKGDRVALMMPNLLQYPIALFGVLRAGMIVVNVNPLYTPRELEHQLSDS
GAVAIVIVSNFAHTLEKVVFKTQVRHVILTRMGDQLSAAKGTLVNFVVKYIKRLVPKYYL
PDAISFRTVLQKGRRMQYVKPDVINTDTAFLQYTGGTTGVAKGAILTHRNMQSNLEQAKA
AYAPLLQPGRDLVVTALPLYHIFALTVNCLLFIELGGRSLLITNPRDIPGMVKELSRYPF
TAITGVNTLFNALLNNEEFTHLDFSTLRLSVGGGMPVQKAVAEKWETLTGKHLLEGYGLT
ECSPLVTGNPYDLKHYSGSIGLPVPSTDVRLRDDDGNDVELGKPGELWVRGPQVMLGYWQ
RPDATDDVLKDGWLATGDIATMDEDGFLRIVDRKKDMILVSGFNVYPNEIEEVVALHAKV
LESAVIGVPNEVSGEAVKVFVVKKDASLTPEELLTHCRRYLTGYKVPKIVEFRDELPKSN
VGKILRRELRDEEVKVGTTDAA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaagtatggctaaagcgctatccggcagatgtccccgcagagattgatccggac
cgctattcatctttgatagaaatgtttgagaacgcggcgttgcgttatgcggaccaaccc
gcatttattaatatgggcgaggtcatgacttttcgtaagctggaagagcgcagccgtgct
tttgctgcctatctacagcaaggtctggggttacagaaaggtgaccgtgttgcactgatg
atgccaaatttactgcaatatcctatcgctttgtttggtgttctgcgggcaggtatgatt
gtcgtgaatgttaatccgctgtataccccgcgtgaacttgagcatcaacttagtgatagc
ggagccgtggccatcgttattgtttccaacttcgcccacacactggaaaaagttgtcttt
aaaacccaggtccggcatgtgattttgacccgaatgggtgatcaactctcggcagcaaaa
gggacgttggttaacttcgtggtgaaatacattaagcgtctggtgccgaagtactatctg
cccgatgccatttcatttcgtaccgtattgcaaaaagggcgtcgaatgcaatacgtcaaa
ccggatgttatcaacacggatacggcattcttgcaatataccggcgggactacgggtgtc
gcgaaaggtgccatattgacacaccgcaacatgcaatcaaatctggaacaggcaaaagcg
gcctatgcaccgttgcttcaacctggccgtgatttggtggtcacggctctgcctctctac
catatctttgcattgacggtaaattgcctgctatttatcgagttgggggggcgcagttta
ttgataaccaacccacgagatatccccggtatggttaaagaactgagtcgttatccattt
accgcgataacaggggtcaatacgttatttaatgcattattgaataatgaagagtttacc
catttggatttctccaccttgcgcctttcggtgggcggcggtatgccagtgcagaaagcc
gtggccgaaaagtgggaaacgctgacgggtaagcatctactggagggttacggtttgact
gaatgctcacctttagttaccggtaacccttatgatctgaaacattacagcggcagtatt
ggtttaccggtaccttcgacagatgttcggctgcgcgatgatgatggcaatgacgtagaa
ttaggcaagccgggtgaactatgggtgcgtgggccacaagttatgttaggctattggcag
cggccagatgccacggatgacgtcctgaaagacggctggctggcgacaggtgatattgcg
acgatggatgaggacggtttcttgcgcatcgttgaccgtaagaaggacatgattctggtt
tctggttttaacgtctaccccaatgagattgaagaggtggtagcgttacatgcgaaagtg
ctggagtctgctgtgattggcgtgcctaatgaggtctccggcgaggcagtaaaagtcttt
gttgttaaaaaagatgcatcactgacacctgaagaattactaacgcattgccgtcgctac
cttaccgggtataaagtaccgaaaattgtagagttccgtgacgaattgccgaagtcgaat
gtgggtaaaatattgcgcagggaactacgtgacgaagaagttaaggtgggtacgacagac
gcagcttaa
DBGET
integrated database retrieval system
