Yersinia pestis KIM10+ (biovar Mediaevalis): y0084
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Entry
y0084 CDS
T00092
Symbol
rfaF
Name
(GenBank) ADP-heptose--lps heptosyltransferase II
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
ypk
Yersinia pestis KIM10+ (biovar Mediaevalis)
Pathway
ypk00540
Lipopolysaccharide biosynthesis
ypk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ypk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
y0084 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ypk01005
]
y0084 (rfaF)
Enzymes [BR:
ypk01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
y0084 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
ypk01005
]
Core region
y0084 (rfaF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
PS_pyruv_trans
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
AAM83678
UniProt:
Q8D1S4
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All DBs
Position
92390..93466
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AA seq
358 aa
AA seq
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MINGMKILVIGPSWVGDMMMSQSLYRTLKAEYPAADIDVMAPAWCRPLLARMPEVRHAIP
MPLGHGAFAFEERRRLGLALRETEYDRAYVLPNSFKSALIPYFSGIKRRIGWRGEMRYFL
LNDLRILDKQAFPMMVQRYVALAYDKERIRSAADLPQPLLWPQLQVRDEEIAETTASFNL
TDNRPIIGFCPGAEFGPAKRWPHYHYATLAQKLIDDGYQVILFGSAKDNEAGEDIRQALS
DTDREYCLNLAGQTSLEQAVVLIAACSAVVSNDSGLMHVAAALNKPLVALYGPSSPDFTP
PLSEKATVIRLITGYHKVRKGDSAQGYHQSLIDIQPEHVMAALEKQLATQECSVKGGD
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
ttgataaacggtatgaaaatactggtcatcggcccttcatgggttggcgatatgatgatg
tcgcaaagtctttaccgtaccctgaaggccgaatatccggcagcagacattgatgtgatg
gcacccgcatggtgccgtccgcttctggccagaatgccggaagtccgtcacgcaattcca
atgccgttaggccatggggcatttgcttttgaggagcgtcgccgtttgggattggcctta
cgtgaaaccgagtatgatcgtgcttacgtgttgcccaactcatttaaatccgcgctgata
ccttacttttcagggatcaaacgacgtattggctggcgtggcgaaatgcgttatttcctg
ctcaatgacctccgtattctggataagcaagcctttccaatgatggtccagcgctacgtt
gcgctggcctatgataaagaacgcatccgttcagcggcagatttaccacaaccgttgttg
tggccgcaattgcaagtacgcgatgaagaaattgcagagacaacggcctcattcaatctg
accgataaccggcccattattggattctgccctggcgcagaatttgggccagcgaaacgt
tggccgcattaccactacgccacgctggcgcagaaattgattgatgatggctatcaggtc
atcttattcggttctgcgaaagacaatgaagctggtgaagatatccgtcaggctctcagc
gatacagatcgtgaatattgcctcaatctggcagggcagacctcactggaacaagcggtc
gttctcatcgccgcctgtagtgccgtcgtgagtaacgactctggtttaatgcatgtcgcg
gcggcactcaacaagccattagtggcattgtatggcccgagcagcccagacttcacgcca
ccactgtcagagaaagccacggtgatccgtctgattaccggctatcacaaagtccgcaag
ggcgattctgcacagggctatcatcaaagtttgattgatatccaacccgaacacgtgatg
gccgcgcttgagaagcaattggctacgcaagaatgctcagtcaaagggggcgattaa
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