Yersinia pestis KIM10+ (biovar Mediaevalis): y0366
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Entry
y0366 CDS
T00092
Symbol
rffG
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ypk
Yersinia pestis KIM10+ (biovar Mediaevalis)
Pathway
ypk00521
Streptomycin biosynthesis
ypk00523
Polyketide sugar unit biosynthesis
ypk00525
Acarbose and validamycin biosynthesis
ypk00541
Biosynthesis of various nucleotide sugars
ypk01100
Metabolic pathways
ypk01110
Biosynthesis of secondary metabolites
ypk01250
Biosynthesis of nucleotide sugars
Module
ypk_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
ypk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
y0366 (rffG)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
y0366 (rffG)
01055 Biosynthesis of vancomycin group antibiotics
y0366 (rffG)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
y0366 (rffG)
00525 Acarbose and validamycin biosynthesis
y0366 (rffG)
Enzymes [BR:
ypk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
y0366 (rffG)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
AAM83955
UniProt:
Q8D1K5
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Position
409316..410389
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AA seq
357 aa
AA seq
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MALRRILVTGGAGFIGSAVVRHIIDGTSDSVVVVDKLTYAGNLESLSVVAGSERYAFEQV
DICDSSELDRVFAQYQPNVVMHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQQ
LSVEAKQAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTY
GLPTLVTNCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGNGAQVRDWLYVEDHARALYQ
VVTEGVVGETYNIGGHNERKNIEVVETICALLDELVPAKPAGIAHYRDLITYVKDRPGHD
MRYAIDAGKIERELGWRPQETFESGIRKTVLWYLNNESWWRRVQDGSYAGERLGLSD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgaggcgaattctcgtcacaggcggggccggttttatcggctctgcggtggtc
aggcatattattgatggcacctcagatagcgtggtggtagtcgataaactcacctatgcc
ggtaatctggagtcgctgtcagtggttgcgggcagtgagcgttatgctttcgaacaagtc
gatatctgtgacagcagtgagttggatcgggttttcgcacagtatcagccgaatgtggtg
atgcatttggctgccgagagccacgttgaccgctcaattgatggccccgccgcgtttatc
gagacgaacgtggttggcacttacaccctgttggaagctgcccgtcactattggcaacaa
ctgagtgttgaagccaagcaggcgttccgctttcaccatatctcaacggatgaggtgtat
ggcgatttacacggcactgacgatttgtttaccgaaaccacgccgtatgcgccaagcagc
ccatattcggcgtctaaagcgtccagtgaccatttagtccgggcttggttgcgtacttat
ggtttaccgactttggtgactaattgttcaaataattacggcccgtatcacttcccagaa
aagctgatcccgctggttattttaaatgcgttggcgggtaagccgctgcctgtttatggc
aatggtgctcaggtccgcgactggttgtatgtagaagaccacgccagagcgttgtatcag
gtggttactgagggtgtggtgggtgaaacctacaatatcggcggccataatgagcgcaag
aatattgaagtagttgaaaccatttgcgcgctattggatgagttggtgccagcaaaaccg
gcgggtatcgcacactaccgtgatttgattacctacgtaaaagaccggccgggtcatgat
atgcgctatgccattgatgctggcaagattgagcgggaactgggttggcgtccacaagaa
accttcgaaagcggtatccgtaaaacggtcttgtggtatttgaataatgaatcttggtgg
cgtcgtgttcaggatggctcttacgccggagagcgtttgggcttgagtgactaa
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