Yersinia pestis KIM10+ (biovar Mediaevalis): y0694
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Entry
y0694 CDS
T00092
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ypk
Yersinia pestis KIM10+ (biovar Mediaevalis)
Pathway
ypk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ypk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
y0694 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ypk03019
]
y0694 (pnp)
03016 Transfer RNA biogenesis [BR:
ypk03016
]
y0694 (pnp)
Enzymes [BR:
ypk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
y0694 (pnp)
Messenger RNA biogenesis [BR:
ypk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
y0694 (pnp)
Transfer RNA biogenesis [BR:
ypk03016
]
Prokaryotic type
tRNA degradation factors
y0694 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
OB_RRP5_4th
UPF0181
aRib
Spt6_S1
KH-I_KHDC4-BBP
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AAM84282
UniProt:
Q0WBF9
LinkDB
All DBs
Position
778073..780286
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AA seq
737 aa
AA seq
DB search
MSLVARMQCEGISNRWIRSSIRSGTAKHKGTILLTPIIRKFQYGQHTVTIETGMMARQAT
AAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGE
TLTSRLIDRPIRPLFPDSFLNEVQVIATVVSVNPQINPDIVALIGASAALSLSGIPFNGP
IGAARVGFINDQYVLNPTTDELKESRLDLVVAGTAGAVLMVESEADILSEEQMLGAVVFG
HEQQQVVIENINALVAEAGKPKWDWQAEPVNEALHARVAELAEARLGDAYRITEKQERYT
QVDAIKADVTEALLAQDDTLDAAEIQDILASVEKNVVRSRVLRGEPRIDGREKDMIRGLD
VRTGILPRTHGSALFTRGETQALVTATLGTARDAQNIDELMGERTDSFLLHYNFPPYCVG
ETGMVGSPKRREIGHGRLAKRGVLAVMPSASEFPYTIRVVSEITESNGSSSMASVCGASL
ALMDAGVPIKAAVAGIAMGLVKEGDNFVVLSDILGDEDHLGDMDFKVAGSRDGVTALQMD
IKIEGITREIMQVALNQAKGARLHILGVMEQAISTPRGDISEFAPRIYTMKINPEKIKDV
IGKGGSVIRALTDETGTTIEIEDDGTIKIAATDGDKAKHAIRRIEEITAEIEVGRIYAGK
VTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQDVPVKVMEVDRQGRIRLS
IKEATTPDAEAPEAAAE
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
ttgtcattagtcgcgaggatgcagtgtgaaggtatcagtaacaggtggattagatcgtca
atacgatcaggcaccgcaaagcataagggtacaattttgctgactccgattattcgtaaa
ttccagtatggtcaacataccgtaactatcgaaactggtatgatggctcgccaggccact
gcagccgtaatggtaagcatggacgacactgcagtattcgtgactgttgttggtcaaaag
aaagccaaaccaggccagagtttcttccctctgacggttaactatcaggagcgtacttac
gctgctggccgtatcccaggtagcttcttccgtcgtgaaggccgcccaagtgaaggcgaa
acactgacttcacgtctgatcgaccgcccaattcgcccactgttcccagacagcttcctg
aacgaagttcaagtgattgcaaccgtcgtttcggttaacccacaaattaacccagacatc
gtggcactgattggtgcatctgcggcactgagcttgtcaggcattccatttaacggccca
atcggtgctgctcgcgttggttttatcaacgaccagtatgtgctgaacccaaccactgac
gagctgaaagagagccgtttggatctggttgttgccggtactgcgggtgcagtgctgatg
gttgaatcagaagccgatattctgtccgaagagcaaatgttgggcgcggtcgtcttcggc
cacgaacaacagcaagttgtgattgaaaatattaacgctttggttgctgaagctggcaaa
cctaagtgggattggcaggcagagcctgtcaacgaagcactgcatgcgcgtgttgctgaa
ctggccgaagcgcgtctgggcgatgcataccgtatcactgaaaaacaagaacgttatacg
caagttgatgctatcaaagctgacgtgaccgaagcgctattagcgcaggacgacacatta
gatgccgctgaaattcaggatatcctggccagcgttgagaaaaatgttgtgcgtagccgt
gtgctgcgtggtgagccacgtatcgatggtcgcgaaaaagacatgatccgtggtttggat
gtacgtactggcatcttgccacgtactcatggttctgccttgttcacccgcggtgaaact
caggcgttggttaccgctacgctgggtacggcacgtgacgcacaaaacattgatgagttg
atgggtgagcgcacagattcattcctgttacactataatttccctccgtattgtgtaggc
gaaacagggatggttggctcacctaagcgtcgtgagattggccatggccgccttgcgaaa
cgtggtgttctggctgtgatgccaagtgcgagcgagttcccttacactattcgtgtggtt
tctgaaatcaccgagtctaatggttcttcctcaatggcttctgtttgtggtgcttctctg
gctctgatggatgcgggcgtgccaattaaagccgctgttgctggtattgcaatgggcctg
gtaaaagagggtgataactttgtcgttctgtctgacattctgggtgacgaagatcacttg
ggcgacatggactttaaagtagccggtagccgtgacggtgtgaccgcactgcaaatggac
attaaaattgaaggtattacccgcgaaattatgcaggtagctctgaatcaggctaagggt
gcacgtttgcacattctgggcgtgatggaacaggctatcagcacaccacgtggcgatatc
tctgagtttgctccacgtatctacaccatgaagatcaaccctgagaaaatcaaggatgtg
atcggtaaaggtggttcggtgatccgtgcgctgactgatgaaactggcaccacgattgaa
atcgaagatgatggtaccattaagattgcagcaactgatggcgataaagcaaaacacgct
atccgtcgtatcgaagagattactgctgaaatcgaagtgggccgtatttacgcaggtaaa
gtcacccgtatcgttgatttcggtgcatttgttgctatcggtggcggtaaagaaggtctg
gtacatatttctcaaatcgctgataagcgtgtagagaaagtgacagactacctgcagatg
ggtcaagatgtgccagttaaagtaatggaagttgatcgtcagggccgtatccgcctgagc
atcaaagaagccactactcctgacgcagaagcaccagaagcagcagcagagtaa
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