Yersinia pestis KIM10+ (biovar Mediaevalis): y0769
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Entry
y0769 CDS
T00092
Symbol
lpdA
Name
(GenBank) lipoamide dehydrogenase (NADH); component of 2-oxodehydrogenase and pyruvate complexes; L-protein of glycine cleavage complex
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ypk
Yersinia pestis KIM10+ (biovar Mediaevalis)
Pathway
ypk00010
Glycolysis / Gluconeogenesis
ypk00020
Citrate cycle (TCA cycle)
ypk00260
Glycine, serine and threonine metabolism
ypk00280
Valine, leucine and isoleucine degradation
ypk00310
Lysine degradation
ypk00380
Tryptophan metabolism
ypk00620
Pyruvate metabolism
ypk00630
Glyoxylate and dicarboxylate metabolism
ypk00640
Propanoate metabolism
ypk00670
One carbon pool by folate
ypk00785
Lipoic acid metabolism
ypk01100
Metabolic pathways
ypk01110
Biosynthesis of secondary metabolites
ypk01120
Microbial metabolism in diverse environments
ypk01200
Carbon metabolism
ypk01210
2-Oxocarboxylic acid metabolism
ypk01240
Biosynthesis of cofactors
Module
ypk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ypk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ypk_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ypk_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ypk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
y0769 (lpdA)
00020 Citrate cycle (TCA cycle)
y0769 (lpdA)
00620 Pyruvate metabolism
y0769 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
y0769 (lpdA)
00640 Propanoate metabolism
y0769 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
y0769 (lpdA)
00280 Valine, leucine and isoleucine degradation
y0769 (lpdA)
00310 Lysine degradation
y0769 (lpdA)
00380 Tryptophan metabolism
y0769 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
y0769 (lpdA)
00670 One carbon pool by folate
y0769 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ypk04147
]
y0769 (lpdA)
Enzymes [BR:
ypk01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
y0769 (lpdA)
Exosome [BR:
ypk04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
y0769 (lpdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
GIDA
Pyr_redox_3
FAD_binding_2
HI0933_like
NAD_binding_8
AlaDh_PNT_C
Thi4
FAD_binding_3
DAO
Motif
Other DBs
NCBI-ProteinID:
AAM84356
UniProt:
A0A3G5LA95
LinkDB
All DBs
Position
860101..861528
Genome browser
AA seq
475 aa
AA seq
DB search
MMSTEIKTQVVVLGAGPAGYSAAFRCADLGLETILVERYSTLGGVCLNVGCIPSKALLHV
AKVIEEAKALAEHGIVFGEPKTDIDKVRVWKDKVINQLTGGLAGMAKGRKVKVVTGFGKF
TGANTLVVDGENGPTTINFDNAIIAAGSRPIQLPFIPHEDSRIWDSTDALALRTVPERLL
VMGGGIIGLEMGTVYHALGSKIDVVEMLDQVIPAADKDVVKVFTKRISKQFNLMLETKVT
AVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLDAGQAGVEVDDRGFIHVDK
QLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGMKHYFDPKVIPSIAYTEPEVAW
VGLTEKEAKEKGISYETSTFPWAASGRAIASDCADGMTKLIFDKETHRIIGGAIVGTNGG
ELLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEIYEGSITDLPNPKAKKK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtactgaaattaaaactcaggtcgtggtacttggggcaggtccagcagggtac
tctgctgcttttcgttgtgcggatttagggttagaaaccattctggttgaacgttactcc
actctggggggggtttgcctgaatgtgggttgtatcccttccaaggcactgttacacgtt
gccaaagtgatcgaagaagccaaagcgctggctgaacatggtatcgtttttggcgagcct
aaaactgatattgataaagtccgtgtctggaaagataaagttatcaatcagttgaccggt
ggtttggcaggtatggctaaaggccgtaaagtcaaagtagtgactggttttggtaaattt
accggtgcgaacaccttagtggttgatggtgagaatggtccaacaaccattaacttcgat
aacgctattatcgcggcgggttctcgcccaattcaactgccattcattcctcatgaagac
tcacgtatttgggattcaactgacgcactggcattgagaacggttcctgagcgcttgttg
gtgatgggcggtggtatcattggtctggaaatggggaccgtttaccacgcactgggttct
aagattgacgtggtcgaaatgcttgatcaggtgatccccgcagcagataaagacgtggtg
aaagtctttaccaagcggatcagcaagcagttcaatctgatgctggaaaccaaagtgaca
gcggtagaagccaaagaagacggtatctatgtcacgatggaaggcaaaaaagcgccagca
gagccacaacgctatgatgcggtgttggttgcgattggccgcgtgcctaacggtaagttg
ctggatgcgggtcaggcgggtgttgaagttgatgatcgtggctttatccacgttgataag
caactgcgcaccaatgtgccacacatttttgctatcggtgacatcgtgggtcagccaatg
ctggcgcataaaggtgtccacgaaggccatgttgccgctgaagttatcgcaggcatgaag
cactatttcgatccgaaagttattccatcgattgcgtacactgaaccagaagtcgcatgg
gttggtttgaccgaaaaagaagcaaaagagaaaggcatcagctacgaaacctccaccttc
ccgtgggcggcatcgggccgtgctatcgcttctgattgcgcagatggtatgactaaactg
attttcgacaaagaaactcaccgtatcattggtggtgcgattgtcggtactaacggtggc
gaactgttaggtgaaatcggtctggccattgagatgggttgtgatgcagaagatatcgca
ttgaccattcatgctcacccaacattgcatgaatcagtgggcctggcggcggaaatctac
gaaggtagcattactgacctgcctaacccgaaagcgaaaaagaaataa
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