Yersinia pestis KIM10+ (biovar Mediaevalis): y0892
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Entry
y0892 CDS
T00092
Symbol
ffh
Name
(GenBank) GTP-binding export factor
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ypk
Yersinia pestis KIM10+ (biovar Mediaevalis)
Pathway
ypk02024
Quorum sensing
ypk03060
Protein export
ypk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ypk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
y0892 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
y0892 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
y0892 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ypk02044
]
y0892 (ffh)
Enzymes [BR:
ypk01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
y0892 (ffh)
Secretion system [BR:
ypk02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
y0892 (ffh)
Eukaryotic Sec-SRP protein
y0892 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
AAA_30
AAA_31
AAA_24
KTI12
AAA_33
APS_kinase
YqeC
VirC1
AAA_14
AAA_16
Fe-ADH_2
AAA_19
ABC_tran
TsaE
DUF5407
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
AAM84476
UniProt:
A0AAX2HYC5
LinkDB
All DBs
Position
1002978..1004339
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AA seq
453 aa
AA seq
DB search
MFENLTDRLSRTLRNISGRGRLTEENIKETLREVRMALLEADVALPVVRDFINRVKERAV
GHEVNKSLTPGQEFVKIVKNELISAMGEVNNELNLAAQPPAVVLMAGLQGAGKTTSVAKL
GKFLKEKQKKKVLVVSADVYRPAAIKQLETLAQGVGIDFFPSDAQEKPIDIVNRALQQAK
LKFYDVLIVDTAGRLHVDEAMMDEIKQVHAAIKPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKSDALEPFHPDRIASRILGMGDV
LSLIEDIESKVDRAQAEKLATKLKKGDGFDLNDFLDQLKQMRNMGGMASMLSKMPGAGQL
PENVKSQMDDKVTVRMEAIINSMTLKERAKPEIIKGSRKRRIATGSGVQVQDVNRLLKQF
DEMQRMMKKMKNGGLAKMMRGMKGMMPPGFPGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaacttaactgatcgattgtcgcgcacactgcgcaatatcagcggccgtggc
cggctgacagaagaaaatattaaagaaacgctacgtgaagtgcgcatggcattacttgaa
gctgacgtcgctctgcccgttgttcgtgactttataaaccgagtaaaagagcgggctgtt
gggcatgaagttaataaaagtctgacgccaggccaagaattcgtcaaaatagttaaaaat
gaattgatcagcgccatgggcgaggtcaataacgaactgaatctggctgcacaaccgcca
gcagttgtgttaatggctggcttgcaaggtgcgggtaagaccaccagtgtagcgaaactg
gggaaatttcttaaagaaaaacagaagaaaaaagtgctggtcgtgtctgctgacgtttat
cgccctgcggcgatcaaacagttggaaaccctggctcagggtgttggcattgatttcttc
ccgtctgatgcacaggaaaaaccgattgatattgtgaatcgtgccctgcaacaggcaaag
cttaaattttatgatgttctgattgtcgataccgcaggtcgcttacacgttgatgaagcg
atgatggacgaaatcaaacaggttcatgcggcgattaagcctgttgaaaccttgtttgtc
gtcgatgcgatgaccggtcaggatgcggcgaataccgccaaagcattcaacgaagcactg
ccactcaccggtgtcgtgctgactaaagtggatggcgatgcgcgcggtggtgcggcttta
tctatccgccatatcaccggtaaacctattaaattccttggcgtcggtgagaaatctgat
gcactggaaccgttccatccagaccgaatagcttcacgtatcttgggtatgggcgatgtg
ctgtcgctgattgaagatatcgaaagcaaagttgaccgtgcgcaagcggagaaactggca
acaaaactgaaaaaaggcgatggtttcgatctcaatgacttcctcgaccagttgaagcag
atgcgcaacatgggggggatggccagtatgttgagtaaaatgccaggggcaggtcagttg
ccagaaaacgtaaaatcgcaaatggatgataaagtcacggtgcggatggaggcgatcatc
aattctatgacgctgaaagagcgcgctaaacctgaaattatcaaaggttcacgtaagcgc
cgtatcgcaaccggttctggtgtgcaggtacaggatgttaaccgtttgctgaaacagttt
gatgaaatgcagcgcatgatgaagaaaatgaaaaacggcggtttggccaaaatgatgcgt
ggcatgaaaggtatgatgccacccgggttcccaggtcgctaa
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