Yersinia pestis KIM10+ (biovar Mediaevalis): y0977
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Entry
y0977 CDS
T00092
Symbol
sbcD
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ypk
Yersinia pestis KIM10+ (biovar Mediaevalis)
Brite
KEGG Orthology (KO) [BR:
ypk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypk03400
]
y0977 (sbcD)
DNA repair and recombination proteins [BR:
ypk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
y0977 (sbcD)
Archaeal homologous recombinant proteins
y0977 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Terminase_3
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
AAM84558
UniProt:
A0AAX2HXJ7
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Position
complement(1105709..1106953)
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AA seq
414 aa
AA seq
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MRIIHTSDWHLGQYFFTKSRAAEHQAFLHWLIEQIKEHQVDALIVAGDIFDTGAPPSYAR
ELYNRFIVELQPTACQLVVLGGNHDSVATLNESRDLLSYLNTSVISCASRDLKQQVIILK
NRQQQPAAVLCAIPFLRPRDLVTSQAGESGDQKQLALQEAIAGHYQTLYQRALELRSQLG
LPLPIIATGHLTTVGVTTTDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRAQQVAKTEH
IRYSGSPIALSFDELSKEKSVYLVEFDQQNLSSVTPLFIPQFQPMQLIKGDLRQIEQQLA
AFAGHEGLPVWLDIEVATQDYLTDIQRRIQALAANLPVEVVLLRRSKEQRNNSIHRQEKE
TLNELTVSDVFERRLALEADLPEPRQQRMRQMFNYVVDEIAQDGSNGVAEEPAQ
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattattcatacctctgactggcatttggggcagtattttttcaccaaaagccgt
gctgctgaacatcaggcatttctgcactggttgattgagcagatcaaagaacaccaggtt
gatgcgctgattgtcgcaggggatatttttgataccggtgccccgcccagctatgcccgt
gagctctataaccgttttattgttgagctccagcctaccgcctgtcaattagtggtactg
ggtggcaaccatgattcggtagccacactgaatgaatcacgagatttactttcatacctg
aatacctcggtaatctcatgtgccagtcgtgatctgaaacaacaagtgattatcctgaaa
aatagacagcagcaacccgcagcggtgctatgcgccattccgtttttacggccccgtgat
ctggtgaccagtcaagcgggtgagtctggtgaccagaaacaactggcattacaagaagct
attgctggccactatcaaacgttatatcaacgcgccctagaactgcgatctcagcttggc
ttgcctctgcccattatcgccaccgggcacctgaccaccgtgggtgtgacaaccacagac
tcagtacgagacatttatattggtacactagatgcctttccggctcaggcttttccaccc
gcggattacattgcccttggtcatatccatcgcgctcaacaggtcgctaaaactgaacat
atccgctacagcggctcacctatagcgctcagttttgatgaactaagcaaagagaaaagt
gtgtatttggtggagtttgaccagcaaaatctgtcatcagttaccccactcttcattcca
caatttcaaccgatgcaattgatcaaaggtgatttgcgccaaatagagcagcaattagcg
gcatttgctggccatgaaggcttacccgtgtggttggatatagaagtggcaacccaagac
tatctcaccgatattcaaagacggatccaggcactggcagcgaacttgcccgttgaagtg
gtattactacgccgtagcaaagaacaacgtaataacagcatccaccggcaggaaaaagaa
acgctaaacgaattgaccgtcagtgacgtatttgaacgtaggctggcactggaggcagat
ttacccgagcctcgccagcagcgaatgcgccaaatgttcaattacgtggttgatgaaata
gcacaagatggcagtaacggtgtggcggaggagccagcccaatga
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