Yersinia pestis KIM10+ (biovar Mediaevalis): y1008
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Entry
y1008 CDS
T00092
Symbol
dxs
Name
(GenBank) 1-deoxyxylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
ypk
Yersinia pestis KIM10+ (biovar Mediaevalis)
Pathway
ypk00730
Thiamine metabolism
ypk00900
Terpenoid backbone biosynthesis
ypk01100
Metabolic pathways
ypk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ypk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
y1008 (dxs)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
y1008 (dxs)
Enzymes [BR:
ypk01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
y1008 (dxs)
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GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_N
TPP_enzyme_C
E1_dh
PFOR_II
GpA_nuclease
Motif
Other DBs
NCBI-ProteinID:
AAM84589
UniProt:
Q8ZC45
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All DBs
Position
complement(1136081..1137940)
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AA seq
619 aa
AA seq
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MSLDIAKYPTLALAENPEELRMLPKESLPKLCDELRQYLLTCVSRSSGHFASGLGVVELT
VALHYVYNTPFDHLIWDVGHQAYPHKILTGRRDRISTIRQKDGLHPFPWRGESEYDVLSV
GHSSTSISAGLGMAVAAEREGKGRRTVCVIGDGAITAGMAFEAMSHAGDIHSDMLVILND
NGMSISENVGGLNNHLAQLLSGKLYASLREGGKKAFSALPPIKDLLKRTEEHLKGMVVPS
TLFEELGFNYIGPVDGHDVHTLTQTLKNMRDLKSPQLLHIMTKKGKGYAPAEKDPIGWHA
VPKFDPASGTLPKSQSSLPTYSKIFGEWLCETAAKDSKLMAVTPAMREGSGMVRFSREYP
QQYFDVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDR
GGLVGADGQTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYHHNGPAAVRYPRGNG
TSAVLEPLEMLPIGKGVLRREGEKIAILCFGTLLAQAQLAAENLNATLVDMRFVKPLDEE
LVLEMAAKHQVLVTVEENAIMGGAGSGVNELLMAKRRWVPVLNIGLPDLFVPQGEQDEMR
SELGLDAAGIQRQIEAWLA
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttgatatagccaaatacccgacattggcactagcggagaacccagaagaactg
cgcatgctgccaaaagaaagcttgccgaagttatgtgatgaactccggcagtatttgctc
acctgtgtcagccgatccagcgggcattttgcttccgggttaggcgtagtcgaactgact
gtcgctttacattacgtttataatacgccgtttgatcatttgatatgggacgtaggtcat
caggcttatccgcacaaaatattgaccggccgccgtgatcgaatctctactattcgtcaa
aaagatggtttgcacccttttccatggcgcggagagagtgaatacgacgtgctttctgtt
ggtcactcctctacatcgatcagcgcgggtctgggtatggcggttgctgccgagcgggaa
ggtaaagggcgacgtaccgtttgcgttatcggtgatggtgctatcaccgcaggtatggct
tttgaagcaatgagtcatgccggagatattcactcagacatgctggttatcctcaatgat
aatggaatgtctatttcagaaaatgtaggtggcctgaacaaccatttggctcagctatta
tctggaaaactctatgccagcctacgtgaaggcggtaaaaaagcattttctgccttacca
ccaatcaaagatctgctgaaacgaaccgaagagcatctgaaagggatggtagtccccagt
acgttgtttgaagagttaggttttaattatattggtcccgttgatgggcatgatgtacac
acgttgacgcaaacgctaaaaaatatgcgcgacctgaaaagtccacaacttctgcacatc
atgactaaaaagggcaaaggctatgctccggcagaaaaggatccaatcggttggcatgcc
gtacctaagtttgatcccgcctccggcaccttgcctaaaagccagagcagcctccccact
tactccaaaatatttggcgaatggttatgcgaaaccgcagccaaagatagcaaattaatg
gcagtgacaccggcgatgcgtgaaggatccggcatggtgcgtttctcgcgcgaatatccg
caacaatatttcgatgtcgccatcgctgaacaacatgcagtgacctttgccgcaggcctg
gctattggtggctacaagcctgtggttgccatctattcgactttcttgcaacgcgcctat
gatcagttgatccatgatgttgctatccaaaatttgcccgtgctctttgccattgaccgt
ggcggtttggtcggtgctgatgggcagactcaccaaggtgcattcgatctttcatttatg
cgctgtattccaaacatggtcattatggcaccaagtgatgagaatgagtgccgtcagatg
ctatacaccggctatcaccataatggacctgccgcagtacgttacccacgaggtaatggt
acgagcgcggtgctggagccattggagatgttgccgatcggcaaaggggtactacgccgt
gaaggtgagaagattgccatcctttgctttggtacgttacttgctcaggcacagcttgcc
gcagaaaacctcaatgccacgctggtggatatgcgtttcgtgaaaccgctagatgaagaa
ttggtattggaaatggcagcaaaacatcaggtattagtgactgtcgaagaaaacgccatc
atggggggggcgggtagcggtgtgaatgagctattaatggcaaaacggcgatgggtccca
gtactcaatattggtttacccgatctatttgtgccacaaggtgagcaagacgaaatgcga
tctgaactcggtttagatgcggcgggtatacagcgtcaaattgaagcttggctagcttaa
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