Yersinia pestis KIM10+ (biovar Mediaevalis): y1270
Help
Entry
y1270 CDS
T00092
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase (photoreactivation)
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ypk
Yersinia pestis KIM10+ (biovar Mediaevalis)
Brite
KEGG Orthology (KO) [BR:
ypk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypk03400
]
y1270 (phrB)
Enzymes [BR:
ypk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
y1270 (phrB)
DNA repair and recombination proteins [BR:
ypk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
y1270 (phrB)
Prokaryotic type
y1270 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF1815
Flg_hook
Motif
Other DBs
NCBI-ProteinID:
AAM84843
UniProt:
A0AAX2I3J1
LinkDB
All DBs
Position
1417535..1418998
Genome browser
AA seq
487 aa
AA seq
DB search
MSTHLVWFRNDLRVTDNLALHAACQDPQASVIAVFIATPVQWAAHGMAPRQAAFLRQNLQ
HLQAALAARGIPLHYHQCDDFQASNTWLVDFCQQQQVDSLFYSQQYELNERLRDDALAVQ
LSERAITCQSFHDSVLLAPGTVLTGNNEMYKVFTPFRRAFIQRLLMSDNHCVPAPKARHA
PPVLLSPLPFDYPQQSVDSQLFPAGEDAALQRLRRFCREQVQDYRQYRDLPAVPGTSCLS
PYLVLGVLSPRQCFNRLWAESPEMLENADSGAFTWLNELIWREFYRHLLVAYPRLCQHHP
FIGWTDGLVWNRSESQLKAWQQGQTGYPIVDAAMRQMNETGWMHNRLRMISASFLVKDLL
IDWRQGERYFMSQLVDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDKDGVFIR
RWLPELAAVPDSDIHQPWRWAERQQQHLDYPVPLVDHKQARLATLAAFEAAKRDSTRIPN
RKEPSCY
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgcatctggtctggttccgcaatgatttacgggtcaccgataatttggcgctt
catgcggcctgtcaggacccacaagcgagcgtaattgccgtgtttattgccacacccgtg
caatgggctgcacatggtatggcacccaggcaggcggctttcctgcgacaaaatttacaa
catttgcaggcagctctcgcggctcgagggataccgctgcattatcaccaatgtgatgat
tttcaggcgtcaaatacttggctagtcgatttttgtcagcaacagcaggtcgatagcctg
ttttattctcaacagtatgaactgaacgagcggttacgtgacgatgcgctggcggtgcaa
ctcagtgagcgagctatcacctgccagtcttttcatgacagtgtattgctcgcgccgggg
acggttctgaccggtaataatgaaatgtataaagtgtttacgccttttcgccgtgcgttt
attcagcgtttattgatgagtgataaccactgtgttccggccccgaaagcccgccatgct
cctcccgttctgctctcaccgttgccttttgattacccacagcagtccgttgatagccag
ttatttcctgcaggggaagacgctgccttacagcgtttacgccgtttttgtcgtgaacag
gtacaggattaccggcaataccgcgatttgccggcggtgcccggtaccagttgcttatcc
ccttatttggtgttgggggtcctttcaccgcgtcaatgttttaatcgcctgtgggctgaa
tccccagaaatgttagagaacgcagacagtggtgcattcacttggcttaatgagctaatc
tggcgtgagttttatcgccatttattagtggcctatccccgtttatgccaacatcatccc
tttattggctggactgatgggttagtatggaaccgatctgaatcgcaattgaaagcctgg
cagcaggggcaaaccggttatcccatcgttgatgccgcgatgcgtcaaatgaatgaaact
ggctggatgcataatcgccttcgcatgatcagcgccagttttttggttaaagacctgttg
atcgactggcggcaaggtgagcgttattttatgtcacaattggtggatggggacttagcc
gcgaataatggcggctggcaatgggccgcatcaaccggtaccgatgccgcaccgtatttt
cgtatttttaatcccaccacgcagggcgagcggtttgataaggacggggtatttattcgt
cgttggttaccggagctggctgcggtaccagacagtgatattcatcagccatggcgctgg
gcagaacggcaacagcagcatctggattatcctgtcccgttggttgatcacaagcaagcc
agattggctacactcgcggcatttgaagccgctaagcgggatagcacaaggatccctaat
cgcaaggagccttcatgttattga
DBGET
integrated database retrieval system
