Yersinia pestis KIM10+ (biovar Mediaevalis): y1297
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Entry
y1297 CDS
T00092
Symbol
rnc
Name
(GenBank) RNase III, ds RNA
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ypk
Yersinia pestis KIM10+ (biovar Mediaevalis)
Pathway
ypk03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ypk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
y1297 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ypk03019
]
y1297 (rnc)
03009 Ribosome biogenesis [BR:
ypk03009
]
y1297 (rnc)
03036 Chromosome and associated proteins [BR:
ypk03036
]
y1297 (rnc)
Enzymes [BR:
ypk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
y1297 (rnc)
Messenger RNA biogenesis [BR:
ypk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
y1297 (rnc)
Ribosome biogenesis [BR:
ypk03009
]
Eukaryotic type
90S particles
RNase
y1297 (rnc)
Prokaryotic type
rRNA processing factors
y1297 (rnc)
Chromosome and associated proteins [BR:
ypk03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
y1297 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
DSRM_2
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
AAM84871
UniProt:
Q8ZD72
LinkDB
All DBs
Position
1441501..1442181
Genome browser
AA seq
226 aa
AA seq
DB search
MNPIVINRLQRKLGYTFQQQELLLQALTHRSASSKHNERLEFLGDSILSFVIANELYRRF
PRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIHTIERLILEWYHSRLEEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLNEPVIGTGSSRRKAEQAAAEQALKQLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatcgtaataaacaggctgcagcggaagctgggctacactttccaacagcag
gagctcttgctgcaagcactgactcatcgtagcgccagcagcaaacacaatgagcgtttg
gagttcctgggtgactctatattaagttttgttatcgccaatgagctatatcgccgtttc
cctcgcgttgatgaaggggatatgagtcgtatgcgggccacattggttagagggaataca
cttgccgaaatggcccgtgaatttgaccttggcgaatgtttacgccttgggccgggtgaa
ttgaagagtggtggttttcgccgcgaatcaattttagccgatacggtagaagccttaatt
ggcggtgtattcttagatagcgatatccatacgattgaacggctgatcctcgagtggtat
cacagtcggttagaggaaatcagccctggtgataagcagaaagacccaaaaacgcgcttg
caagagtatttgcagggccgtcatctgccattaccttcatatctggtcgtgcaggttcgc
ggcgaagcacatgaccaggaatttactatccactgccaggtgagtggcttgaatgaacca
gtaataggtactggctcaagccgtcgtaaagctgagcaggcggcagcggaacaagcgctg
aaacagttggagcttgaatga
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