Yersinia pestis KIM10+ (biovar Mediaevalis): y1308
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Entry
y1308 CDS
T00092
Name
(GenBank) putative periplasmic binding transport protein
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
ypk
Yersinia pestis KIM10+ (biovar Mediaevalis)
Brite
KEGG Orthology (KO) [BR:
ypk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ypk01011
]
y1308
Enzymes [BR:
ypk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
y1308
Peptidoglycan biosynthesis and degradation proteins [BR:
ypk01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
y1308
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GFIT
Motif
Pfam:
SLT
SBP_bac_3
DUF7555
Motif
Other DBs
NCBI-ProteinID:
AAM84882
UniProt:
Q74SQ6
Structure
PDB
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Position
complement(1449970..1451523)
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AA seq
517 aa
AA seq
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MLRKMPLHWGFNHVEFSFTAHTKRAFPRDNYLTRIKLSYFTIGLVALLLALALWPNIPWR
NGQEGQLDQIKARGELRVSTISSPLIYSTEKDTPSGFDYELAKRFADYLGVKLVIIPHHN
IDDLFDALDNDDTDLLAAGLIYNRERLNRARTGPAYYSVSQQLVYRLGSPRPKSFSDLKG
QVVVASGSAHMTTLKRLKQTKYPELNWSSSVDKSGKELLEQVAEGKLDYTLGDSATIALL
QRIHPQLAVAFDVTDEEPVTWYFKQSDDDSLYAAMLDFYSEMVEDGSLARLEEKYLGHVG
SFDYVDTKTFLSAIDNVLPSYQHLFEKHAGDIDWKLLAVIAYQESHWNPQATSPTGVRGL
MMLTRATADGLGVKDRVDPEESIRGGAIYLQRLMKKLPETIPEDERIWFALAAYNLGYGH
MLDARRLTKNQNGNPDSWVDVKMRLPMLSQKRYYPSTTYGYARGHEAYNYVENIRRYQVS
LVGYLQEKEKKAAQHAAIEAELGKSNPVVGPGWSIGD
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
ttgttgcgcaaaatgccactccactggggatttaaccatgttgaatttagctttaccgca
cacacgaagagagcgtttccgagagataactatttgacacgcataaaattaagttacttt
accatcggtctggttgctctgcttctggcgcttgcgctgtggcccaatattccttggcgt
aatgggcaagagggccaacttgaccaaataaaagcccgtggagaactgcgcgtcagtacc
atcagttctcctttgatctactctaccgaaaaggataccccttccggttttgactatgag
ctagcaaaacgttttgctgactatctgggggttaaactggttatcatcccccatcataat
attgacgatctgtttgacgcattagataacgatgacaccgatctgctagccgctgggctg
atttataaccgtgaacgcctcaatcgggcgcggactggccctgcctactattctgtttct
cagcaattggtctaccggctgggttcgccacggcctaaatcgttcagcgatctgaaaggt
caggtggttgtggcctccggttcggcccatatgaccacactaaaacggcttaagcagaca
aaatatcctgaactcaattggagttcatccgtcgataagtccggtaaagaattactggag
caagtcgcggaaggtaagctcgactatacccttggcgattcagccaccattgccctgtta
caacgcattcatccgcaattggcagtcgcatttgatgtcaccgatgaagagcccgtcacc
tggtattttaaacagagtgatgacgatagcctgtatgcggccatgctcgatttctacagt
gagatggtggaagacggtagcctcgcacgtctggaggagaaatatctgggtcatgtgggg
agttttgactatgttgataccaaaactttcctgtccgctatcgataatgtcctgccctct
taccagcacctatttgaaaaacatgcaggggacattgactggaaattgctggccgtgatt
gcctatcaagaatcacattggaacccgcaagccacctcccctactggtgttcgtggcttg
atgatgctaacccgtgcgaccgcggacgggttaggggtcaaggatagggttgaccctgaa
gaaagcatcagaggcggggctatctatttgcaacggctgatgaaaaaactccctgaaacc
atcccagaagatgaacgcatctggtttgcactggctgcgtataatttaggctatggtcat
atgctggatgcccgccgtttgactaaaaatcagaacggtaacccagacagttgggttgat
gtgaaaatgcgtttaccgatgctaagccaaaaacgctactacccaagcaccacttacggt
tatgcccgtggtcatgaagcctataactatgtcgagaatattcgccgttatcaggtcagt
ctggtgggatatttacaggaaaaagagaaaaaagcggctcaacatgccgccattgaggcg
gagctgggcaaaagcaacccggttgtcggccccggttggtcaatcggtgactaa
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