Yersinia pestis KIM10+ (biovar Mediaevalis): y1660
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Entry
y1660 CDS
T00092
Symbol
menD
Name
(GenBank) 2-oxoglutarate decarboxylase
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
ypk
Yersinia pestis KIM10+ (biovar Mediaevalis)
Pathway
ypk00130
Ubiquinone and other terpenoid-quinone biosynthesis
ypk01100
Metabolic pathways
ypk01110
Biosynthesis of secondary metabolites
ypk01240
Biosynthesis of cofactors
Module
ypk_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
ypk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
y1660 (menD)
Enzymes [BR:
ypk01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
y1660 (menD)
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Motif
Pfam:
TPP_enzyme_M_2
TPP_enzyme_N
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
AAM85229
UniProt:
Q7CJ76
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All DBs
Position
1834514..1836217
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AA seq
567 aa
AA seq
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MSTSVFNRRWAALLLEALTRHGVRHICIAPGSRSTPLTLAAAANPSLVCHTHFDERGLGH
LALGLAKASTEPVAVIVTSGTAVANLYPALIEAGLTGERLILLTADRPPELIDCGANQAI
RQQGLFASHPTLSVNLPRPTPDISARWLVSTLDSAMAQLQHGALHINCPFAEPLYGGDEQ
QYADWSASLGDWWQDCHPWLRQTCYPPSLYQPPAQQADWFFWRQKRGVVIAGRMGAQEGR
QLTAWAAMLGWPLIGDVLSQTGQPLPCADLWLAHPRAQETLAQAQMVLQFGSSLTSKRLL
QWQTACQPQEYWLVDSAPGRLDPANHRGRRIICPVGEWLSRHPAQRRTPWATELAAYSES
AQAQVIETLAGQFSEAAVAHQLAELLPDNGQLFVGNSLIVRLIDALGQLPAGYPVYSNRG
ASGIDGLLSTAAGVQRATAKPTLAIVGDLSALYDLNALALLRQSSAPMVLLVINNNGGQI
FSLLPTPEAERQRFYCMPQDVNFEHAAVMFSLGYARPNSWPQLRELAHQCWLRGGTTLIE
VQVPPSQGAETLQQLVQQVTLIPQVAP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaagtgtttttaaccgtcgttgggcggcactgctactggaggctttgacccgc
cacggtgtgcgtcatatctgtattgccccagggtctcgctctacaccgttaacgttagcg
gctgccgctaatccgtcgttggtttgccatacccattttgatgagcgcggtctgggccat
ctggctctggggctggcgaaggcctcaacagaaccggtggcggtcattgtcacctcgggt
acggcggtggcgaatctttatcctgcgctaatcgaagcggggttaacgggtgagcggctg
atattattgaccgctgatcgcccaccggagttaatcgattgcggtgccaatcaggctatc
cgccagcaggggctgtttgccagccatccaaccctaagtgttaatctccccagaccgacg
cccgatatctctgcccgttggttggtttccacactcgacagcgcgatggcgcaattgcaa
catggcgctttgcacattaattgtccctttgctgaaccactgtatgggggggatgagcaa
cagtatgccgactggtctgcctcgctgggcgattggtggcaggattgtcacccatggctg
cgtcaaacctgttacccgccctctctttatcaaccaccagcacagcaagctgactggttt
ttctggcggcaaaaacgtggcgtcgtgattgccggacggatgggcgcgcaagagggtagg
caactgaccgcatgggctgcaatgctgggctggccactgattggcgatgtattgtcacaa
accggtcagccattgccttgtgctgacttatggctggcgcacccacgggcgcaagaaacc
ctcgctcaagcacagatggtgttgcaatttggcagcagtctgaccagtaagcgcctttta
caatggcagaccgcatgtcagccacaggaatactggctggtggatagcgccccaggccgc
cttgatcctgctaaccatcgtggccgacgtattatttgcccggtgggcgagtggttgagt
cggcaccccgcgcagcggcgtacaccttgggccacggaactggcggcatattcggaaagt
gcgcaagcacaggtgatcgagacgctggccggccaattcagtgaggccgccgtggcacat
cagctcgcggaattattaccggataacggccagctatttgttggcaacagtttgattgtc
cggttgattgatgcgctggggcagctacccgcaggctatccggtttacagcaatcggggg
gccagcggtatcgatggtttgctgtcaaccgccgccggtgtacagcgcgcgacggcgaaa
ccgacattagctatcgtcggtgatttgtctgccttatatgaccttaatgcgctggcactt
ttgcgccagagctcggcaccgatggtgctactggtgatcaataacaatggggggcagatt
ttctctttattgccaacgccagaggccgagcgccagcgtttctactgtatgccgcaggat
gtgaacttcgaacacgcggcggttatgttcagcttaggttatgctcgccctaatagctgg
cctcagctacgggagctagcgcatcaatgctggctacgggggggaaccacgctgattgaa
gtccaggtgccaccaagtcagggggcagaaacactgcaacagttagtacaacaggtgaca
ttaataccgcaggtggccccatga
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