Yersinia pestis KIM10+ (biovar Mediaevalis): y1938
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Entry
y1938 CDS
T00092
Name
(GenBank) hypothetical protein
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
ypk
Yersinia pestis KIM10+ (biovar Mediaevalis)
Pathway
ypk00450
Selenocompound metabolism
ypk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ypk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
y1938
Enzymes [BR:
ypk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
y1938
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
y1938
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
Beta_elim_lyase
SelA
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AAM85504
UniProt:
Q8D0M6
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All DBs
Position
2136616..2137848
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AA seq
410 aa
AA seq
DB search
MGVCMNFPIERVRADFPLLSRQVNGQPLVYLDSAASAQKPQAVIDKELHFYRDGYAAVHR
GIHSLSAEATQQMEAVRTQVADFIHAASAEEIIFVRGTTEAINLVANSYGRHFLAAGDSI
IITEMEHHANIVPWQMLAQDLGVEIRVWPLTATGELEITALAALIDDTTRLLAVTQVSNV
LGTVNPIKDIVAQAKAAGLVVLVDGAQAVMHQPVDVQALGCDFYVFSGHKLYGPSGIGIL
YGKSALLQQMPPWEGGGAMIKTVSLTQGTTFADAPWRFEAGSPNTAGIMGLGAAIDYVTE
LGLLPIQQYEQSLMHYALAQLSQIKSLTLYGPTERAGVIAFNLGQHHAYDVGSFLDQYGI
AIRTGHHCAMPLMAFYQVPSMCRASLALYNTREDVDRLVAGLQRIEKLLG
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
gtgggagtctgtatgaattttcctattgaacgtgtaagagctgattttccactgttgagc
cgccaggttaatgggcagccgttggtttatctggacagcgcagccagtgcgcaaaaacct
caggcggtcattgacaaggagcttcatttttaccgtgatggttatgcggccgttcatagg
ggcattcacagtttaagtgctgaagcgactcagcagatggaagccgtacgcactcaggtg
gctgattttattcacgccgcctccgcagaagaaattatttttgtcagaggcaccactgaa
gcaatcaatttggttgctaacagttatggccgccatttccttgccgcgggtgatagcatt
atcattaccgaaatggaacaccatgccaatattgtgccttggcagatgttggcgcaagat
cttggtgttgaaatccgtgtttggccactgacggctaccggtgagttggagataaccgcc
ctggcagcgttgattgatgacaccacgcgcttactggcggtgactcaggtctccaacgtg
ttgggaacggtaaacccgattaaggatattgtggcccaggcaaaagccgccggtttagtg
gtgttggtggatggtgcgcaagcggttatgcatcagccagttgatgttcaggcgttgggc
tgcgatttttatgttttctcagggcacaaactgtacggcccatcgggtattgggattctg
tacggcaaaagtgcgttgttacaacagatgccgccatgggaagggggcggggcgatgatc
aaaacagtcagtttgacgcaaggcactacgtttgctgacgccccttggcgctttgaggct
gggtcacctaatactgcgggtatcatggggcttggcgcggccattgactatgtcactgaa
ttggggctcttgccgatccaacagtatgagcaatcgctgatgcattacgcattggcgcaa
ctgagccagattaagagcctgacactgtatggcccaacagagcgtgccggggttattgcc
ttcaatctgggccagcaccatgcctatgatgtgggcagctttcttgaccaatacggtatt
gctattcgtacgggtcatcactgtgcgatgccgctgatggcattctatcaggtaccgagt
atgtgccgtgcctcactggcgctgtataatacccgcgaggatgttgatcggttggtggca
ggattacagcgtatcgaaaaattgctggggtga
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