Yersinia pestis KIM10+ (biovar Mediaevalis): y2253
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Entry
y2253 CDS
T00092
Symbol
ruvA
Name
(GenBank) Holliday junction helicase subunit B
KO
K03550
holliday junction DNA helicase RuvA
Organism
ypk
Yersinia pestis KIM10+ (biovar Mediaevalis)
Pathway
ypk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
y2253 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypk03400
]
y2253 (ruvA)
DNA repair and recombination proteins [BR:
ypk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
y2253 (ruvA)
RecFOR pathway proteins
y2253 (ruvA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
IMS_HHH
HHH_8
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
AAM85813
UniProt:
Q8ZEU6
LinkDB
All DBs
Position
complement(2483197..2483877)
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AA seq
226 aa
AA seq
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MNAANHAVASILKGIVGKERINVIGRLRGIILEKQPPLVLLETNGVGYEVQLPMTCFYEL
PELGQEAIIFTQFVVREDAQLLYGFNNKQERALFRELIKVNGVGPKLALAILSGMSAQQF
VGAVEREDITTLVKLPGVGKKTAERLVVEMKDRFKGLNGDLFNNTGDISLPTASPQTSDA
DIEAEAASALVALGYKPQEASRLVSKIAKPGADCETLIRDALRAAL
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgctaaccacgcagtagcgtcaattctgaaggggatagtgggcaaggagaga
atcaacgtgataggccgtctcagaggtatcattctggaaaaacagccaccgctggtgctg
ctggaaacaaacggtgttggctatgaagtccaattaccaatgacctgcttctatgagtta
cccgagttggggcaggaagccattatcttcacccagtttgtggtacgcgaagatgcgcag
ttactgtatggtttcaataataagcaggagcgggcgctgttccgtgaattgatcaaagtt
aacggcgtcgggccaaaactggctttagccattctctccgggatgtctgcacagcaattt
gttggcgcagtcgaacgtgaagatattacaacgctggtaaaactgccgggtgtcggtaaa
aagaccgccgagcggttagtggtcgaaatgaaagatcgctttaaaggccttaacggcgat
ctgtttaataataccggtgatatctcgttaccaacggcttcgccacaaacctcggatgct
gatatcgaagcggaagccgcttctgcactggtcgcgctgggttataaaccacaagaggcc
agccgtttagtgagtaaaattgccaagccgggtgccgattgtgaaacactgatccgtgat
gctctccgtgcggcgttataa
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