Yersinia pestis KIM10+ (biovar Mediaevalis): y3346
Help
Entry
y3346 CDS
T00092
Name
(GenBank) periplasmic binding protein for ABC transporter
KO
K10439
ribose transport system substrate-binding protein
Organism
ypk
Yersinia pestis KIM10+ (biovar Mediaevalis)
Pathway
ypk02010
ABC transporters
ypk02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ypk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
y3346
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
y3346
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ypk02000
]
y3346
Transporters [BR:
ypk02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
y3346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AAM86896
UniProt:
A0AAX2I0P5
LinkDB
All DBs
Position
complement(3687658..3688617)
Genome browser
AA seq
319 aa
AA seq
DB search
MKKRLIGLLLAGVTISMSVSAAEPLKIGFANRTLNGAFFNGLTEYMKIHAKEKGYTLITT
DARGDLNKQIADVEDMLSQGINYLILNPQDPQAGLRITEIAKRAGVPTVILDSDIALEAP
VITRVQANNAKNNNLIGEYAVGQFGDKPMNCIFLSGNQGNLVGQARRDNFLLGVAEAQLR
KYNRTNVNFLSQGWGNWDQQGGLKAMEDIIVAQGDKINCVYSEMDDMALGAIRALKAANK
LDNVKVYAHDGYKKGLEAVKKGELQATASNNPDLLTSTVLEVIGQYQAGQTSFPDYVYIP
SILITKDNVDKYYKEDSIF
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagactaattggcctgctgttggccggtgtcaccatctcaatgagtgtctct
gccgcagagccactcaagatcggcttcgctaaccgtaccttgaatggcgctttctttaat
ggactgaccgaatacatgaagattcatgccaaggagaaaggctatacattaattaccacc
gatgcccgcggtgatttgaataagcaaattgctgatgtggaagacatgctgtcacagggg
attaattatctgatactcaatccgcaagatcctcaagcgggtttgcgcattactgaaatc
gccaagcgggctggtgtacctactgtgatcctcgatagcgatatcgcacttgaagctccg
gttatcacgcgagttcaggccaataatgccaaaaataacaacctgatcggcgaatatgcg
gtgggccagtttggcgacaaaccgatgaactgcatatttctcagtggtaaccaaggtaat
ttggtcggccaggcgcgccgtgacaacttcctgctgggggttgctgaagcgcagttacgt
aaatacaaccgcactaatgtgaactttcttagccaaggatgggggaattgggatcagcag
ggcggtttgaaagctatggaagatattattgtggcgcagggtgataaaattaactgtgtt
tacagtgaaatggacgatatggcgttaggtgccatccgtgcgctgaaagcggctaacaag
ctggataatgtcaaagtgtatgctcatgacgggtataaaaaggggctggaagccgtgaaa
aaaggcgaactgcaagcgacggcctcgaataacccagacttgctgaccagcacggtgcta
gaggttattggtcaatatcaggccggtcagacgagttttcctgattatgtctatatcccc
tccattctgatcactaaagataacgtcgacaaatattataaagaagattcgattttctaa
DBGET
integrated database retrieval system
