Yersinia pestis El Dorado: CH46_2335
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Entry
CH46_2335 CDS
T03719
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ypl
Yersinia pestis El Dorado
Brite
KEGG Orthology (KO) [BR:
ypl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypl03016
]
CH46_2335 (truA)
Enzymes [BR:
ypl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CH46_2335 (truA)
Transfer RNA biogenesis [BR:
ypl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CH46_2335 (truA)
Prokaryotic type
CH46_2335 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
WVELL
Motif
Other DBs
NCBI-ProteinID:
AJJ14447
UniProt:
Q8ZD27
LinkDB
All DBs
Position
complement(2565316..2566110)
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AA seq
264 aa
AA seq
DB search
MKIALGIEYNGSRYFGWQRQQEVASVQACLEAALSKVANEPIGVFCAGRTDAGVHATGQV
VHFVTSAVRKDAAWTMGVNSHLPADIAVRWVKTVDNDFHARFSATARRYRYIIFSHRYRP
AILAQGVTHCYMPLDAEKMERAAQCLLGENDFTSFRAVQCQSRTPWRNVKHVKVTRHGAY
IVVDIKANAFVHHMVRNIVGSLIEIGCGNQDVTWMAELLALKDRTRAAATAKADGLYLVS
VDYPDHFALPKVPMGPLFLADDEG
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaattgcgttgggtattgagtataacggtagccgctattttggttggcaacggcag
caagaggttgccagcgtgcaggcctgtcttgaggcggcattatccaaagtggctaatgaa
cccattggggtcttctgcgctggccgtaccgatgcaggggtccatgctaccgggcaagtt
gtgcactttgttacctctgcagtacgtaaagacgccgcctggactatgggggtcaacagc
catttgcccgcggatatcgcagtgcgttgggtcaaaaccgtcgataacgattttcatgcc
cgctttagcgcaacggcccgccgctatcgctatatcatttttagccaccgctatcgccct
gcgatattggcgcaaggggtcacccattgctatatgccattggatgcagaaaaaatggaa
cgcgccgcgcaatgtttactcggcgaaaatgattttacctctttccgtgccgtacaatgt
caatcccgcacgccatggagaaatgtaaaacatgtcaaagttacccgacatggcgcgtat
atcgtggtagatatcaaggccaacgcgtttgtacatcatatggtgcgcaatatcgttggg
agcctgatagaaattggttgtggcaatcaggacgtgacctggatggcagaattgttggcg
ttgaaggacagaacacgtgctgccgcaaccgccaaagccgatgggttgtatttagtgtct
gtcgattacccggaccacttcgcgttacccaaagttcctatggggcctttgtttttggcg
gatgacgagggttaa
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