Yersinia pestis El Dorado: CH46_3347
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Entry
CH46_3347 CDS
T03719
Symbol
dbpA
Name
(GenBank) ATP-independent RNA helicase dbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
ypl
Yersinia pestis El Dorado
Brite
KEGG Orthology (KO) [BR:
ypl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ypl03009
]
CH46_3347 (dbpA)
Enzymes [BR:
ypl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CH46_3347 (dbpA)
Ribosome biogenesis [BR:
ypl03009
]
Prokaryotic type
rRNA helicases
CH46_3347 (dbpA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Helicase_C_2
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AJJ14151
UniProt:
A0A3G5L555
LinkDB
All DBs
Position
complement(3647773..3649155)
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AA seq
460 aa
AA seq
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MSTTSFSSLTLPAEQLSNLNELGYTEMTPVQAAVLPAILNGQDVRAKAKTGSGKTAAFGI
GLLDKIAVGEFVTQALVLCPTRELADQVSKELRRLARFTQNIKILTLCGGQPMGHQLDSL
VHAPHIVVGTPGRIQEHLRKKTLVLDELKTLVLDEADRMLDMGFSDAIDDVIAYTPPQRQ
TLLFSATYPSGIEQISARVQRQPLNVEVGDTDEEPAIEQVFFETTREKRLPLLISVLSHY
QPASCVVFCNTKKDCQSVYESLESRGISVLALHGDLEQRDRDQVLVRFANRSCRVLVATD
VAARGLDIKDLELVINFELAFDPEIHIHRIGRTGRAGMSGLAVSLCTPQEMVRAHTIEDY
LQIKLKWTPAEQVSRSTNIMLEPEMVTLCIDGGRKAKIRPGDILGALTGDAGLTAADVGK
IDMFPVHAYVAIRKASAKRALQQLQQGKIKGKNCKARLLK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacaacttccttttcttccctgacactgcctgctgagcagttgtccaatcttaat
gaacttggctataccgagatgaccccggtacaagctgcggtgttacccgcaatcctcaac
gggcaggatgtccgggcgaaggccaaaaccggcagcggtaaaacagccgcatttggcatt
ggtttgctggacaaaatagcggtaggggaatttgttacccaagcgctggtattgtgccca
acccgagaattagcagaccaggtcagtaaagagctgcgccgtttagcacggtttacacaa
aatattaaaattctgaccctgtgtggcggccaaccgatgggccaccaattagattctctg
gtccatgcaccgcacattgtcgtgggtacgccagggcgtattcaggaacatctgcgcaag
aaaacgctggtacttgatgagttgaaaacgctggtgttggatgaagctgatcgcatgttg
gatatgggtttttccgatgccattgatgacgtgattgcgtatacccctccacagcggcaa
accttgttgttctctgccacctacccatcaggtattgagcagatcagtgcacgagttcag
cgccaaccattgaatgttgaagtgggtgataccgatgaagagcccgctattgaacaggtg
ttttttgaaacgactcgtgagaaacggctgccactgctgatctcagttctgagccattac
cagccggcctcttgtgtggtgttctgtaacaccaaaaaagattgtcagagcgtttatgag
tcactggaatcacgtggtatcagtgtcttggctttgcacggggatttagaacagcgtgat
cgtgatcaggttctggtgcgttttgccaatcgtagctgccgtgtgttggtggcgaccgat
gttgctgctcgtggtttagatatcaaggatctggagctggtcattaactttgaattggcg
tttgatcccgaaattcacatacaccgcattggccgtaccgggcgcgcagggatgagcggc
ctggccgttagcctatgtacgccacaggaaatggtacgtgcccataccatcgaagattat
ctgcaaataaaattgaaatggacacctgcggaacaggttagccgtagcaccaacatcatg
ctggaaccagaaatggtgacgttatgcattgacggggggcgcaaagctaaaattcgccct
ggtgacattctcggggcattaaccggtgatgcagggttaaccgccgcagatgtgggtaag
attgatatgttcccggttcatgcctatgtggctatccgtaaagccagtgccaagcgtgcg
ttgcaacaattgcagcaaggcaaaatcaaaggtaaaaactgtaaagcccgtctattaaaa
taa
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