Yersinia pestis El Dorado: CH46_3409
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Entry
CH46_3409 CDS
T03719
Symbol
kdgR
Name
(GenBank) pectin degradation repressor protein kdgR
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
ypl
Yersinia pestis El Dorado
Brite
KEGG Orthology (KO) [BR:
ypl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ypl03000
]
CH46_3409 (kdgR)
Transcription factors [BR:
ypl03000
]
Prokaryotic type
Helix-turn-helix
IclR family
CH46_3409 (kdgR)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR
HTH_IclR
TrmB
HTH_24
HTH_5
MarR_2
Rrf2
Fe_dep_repress
HTH_45
PadR
Mga
HTH_11
MarR
Motif
Other DBs
NCBI-ProteinID:
AJJ13562
UniProt:
A0A0H2W3H7
A0A2U2H1M3
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Position
complement(3711390..3712181)
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AA seq
263 aa
AA seq
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MAIADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMPKSTVYRFLQTMKSLGY
VAQEGESEKYSLTLKLFELGAKALQNVDLIRSADIQMRELSNETRETIHLGALDEDSIVY
IHKIDSMYNLRMHSRIGRRNPLHSTAIGKVLLAWRDRGEVEEILSHIEFTRSTKYTLDST
AALLPVLDKVREQGFGEDIEEQEEGLRCIAVPVFDRFGVVIAGLSISFPTLRFAEDRKSD
YVKSLHCAARNISEQMGYRDYPF
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggctattgcagatctagataaacagcccgactctgtctcgtcggtgctgaaggttttt
ggcatattacaagcgttgggtgaagaacgggaaataggtattaccgagctttctcagcga
gtcatgatgcctaagagtacagtttatcgttttctccaaaccatgaagtccttgggttat
gtggcacaggaaggcgaatcggagaaatattccctcaccctgaagctatttgaattgggt
gcgaaagcgctgcaaaatgtcgatttgattcgcagtgctgatattcagatgcgtgaatta
tctaatgaaactcgtgaaactattcacttgggtgcattggatgaagatagcattgtgtat
attcataaaattgactcgatgtataacctacgaatgcattcccgcattggccgccgcaac
ccattacacagtactgccattgggaaggtgctattagcctggcgtgatcgtggtgaagta
gaagaaattctgtctcatatcgaatttacccgcagcaccaaatatacgttggatagcact
gctgcactgttaccggttttagataaggtacgtgagcaagggtttggtgaggatattgaa
gaacaggaagaaggtttgcgttgtatcgcagttcctgtctttgaccgttttggtgtggtg
attgccggattaagtatttctttcccgacactacgtttcgctgaagacagaaagagtgat
tacgttaaatcgttacattgcgcagcccgcaatatttctgagcaaatgggttaccgcgat
tatcctttctga
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