KEGG   Yersinia pestis El Dorado: CH46_3687
Entry
CH46_3687         CDS       T03719                                 
Symbol
helD
Name
(GenBank) helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
ypl  Yersinia pestis El Dorado
Brite
KEGG Orthology (KO) [BR:ypl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ypl03400]
    CH46_3687 (helD)
Enzymes [BR:ypl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CH46_3687 (helD)
DNA repair and recombination proteins [BR:ypl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CH46_3687 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 Viral_helicase1 AAA_11 nSTAND_NTPase5 DEAD ADDB_N ResIII
Other DBs
NCBI-ProteinID: AJJ13404
UniProt: A0AAX2HZE5 Q0WGX7
LinkDB
Position
complement(4034882..4036867)
AA seq 661 aa
MELKATSFGKHLSQHPYNRVRLLNAGIEVCGDKHQYLIPFNQLVSIQCKRGIVWGELEFE
LPQQKVVRLHGTEWQETQHFYHYLLGVWQQWSEEMSQVCAEVLHKQVESIKRIEQQDKWF
KRSELGQIQVMIREAFSALPMPVERLAAFESCRADYECCLRWLQQGRHSVERCNQQWTAR
MLEEYQDFFQNVETSPLNASQSRAVVNGEDSVLVLAGAGSGKTSVLVARAGWLLRRNEAL
PEQILLLAFGRQAADEMNSRIKQRLGVDSIQAKTFHALALHIIQQGSRKTPVISKLESDS
QARRALLIQHWQQQCSEKKAQDKRLAARLASRLERWVGLMRMYGGSQAEMIEQANDEVRD
LFQKRIRLMAPLLKAWKTALKDEGAVDFSGLIHQAVNLLEKGRFVSPWKHVLVDEFQDIS
PQRAMLLAALRKQNKQTCLFAVGDDWQAIYRFSGAELSLTTAFSEHFGEGAECALDTTYR
FNDRIGDIANRFIQQNPYQLKKPLNSLSKGNKKSVMILPDEQLEALLDKLSGFVKDGERI
LILARYHHLRPEVLQKAATRWPKLTIDFMTIHASKGQQADYVIIVGLHEGNDGFPAAARE
SVLEDVLLPPPEDFPDAEERRLLYVAITRAKHQVWLLQDTARPSIFVSQLSELGALVQRK
P
NT seq 1986 nt   +upstreamnt  +downstreamnt
atggaacttaaagcgacatcttttggcaaacatctgtctcagcatccctataaccgggtc
cgcttgctgaatgcaggcatcgaagtctgcggtgataaacatcaatacctaatccctttt
aaccaactggttagtattcagtgtaaacgaggtatcgtttggggcgagcttgaatttgag
ttgccgcagcagaaagttgtacggttgcacggtactgaatggcaggaaacacaacatttc
tatcattacttgctaggggtatggcagcaatggagtgaagaaatgagccaggtttgtgcg
gaggtgctgcataaacaggtggagtcaattaagcgaattgaacagcaggataaatggttt
aaacgcagtgaattaggccagatacaagtcatgatccgcgaggcattcagtgccttacca
atgccagtggaacgcttagcggcgtttgaatcctgtcgagcagattatgaatgctgcctg
cgttggttacagcaaggtcgtcacagtgttgaacgatgtaatcagcaatggacagcccgt
atgttggaggagtatcaagattttttccaaaatgtagaaacttcgcccctgaatgcctca
caaagccgggcggtggttaacggtgaagattcagttttggtgttagccggcgcgggtagc
ggtaaaacatcggtgctggtggcgcgtgcgggctggttgctacgtcgtaatgaggcacta
cctgagcagattttattgctggcatttggtcgccaggcggccgatgaaatgaatagccgt
attaaacaacgcttgggcgtggatagcatccaagctaaaacttttcatgctctggcatta
catattatccagcaaggtagccgcaagacaccggttatcagcaagcttgagtctgatagc
caggccagaagggcgttgttaattcaacattggcagcaacagtgtagcgagaagaaagca
caggacaaaaggttggctgcgaggctggcaagtcgccttgaacgttgggtagggttgatg
cgtatgtacggtggcagtcaggctgaaatgattgagcaagcgaatgacgaggtgcgtgac
ctgtttcaaaagcgtatccgtttaatggcaccgttgctaaaagcctggaaaacggcattg
aaagatgagggtgccgtcgatttttctgggttgattcatcaggcggttaacttgctggag
aaagggcgctttgtcagcccatggaagcatgttttggttgatgagttccaggatatctca
ccacaaagggcgatgttactcgcggcgctgcgtaaacagaataagcaaacttgcctgttt
gcggttggcgatgattggcaggctatttaccgcttcagtggtgctgaactttcgctgaca
acggcttttagcgagcattttggtgaaggtgctgaatgtgcactggatacgacttaccgc
tttaatgatcggattggtgatattgcgaaccggtttattcagcaaaacccttatcaactg
aagaaaccacttaatagcttgagtaagggtaataaaaagtcggtcatgattttacccgat
gagcagttggaggccctattagataaattaagcggctttgttaaggacggcgaacgtatc
ctaatattggcgcgttaccatcatttacgccccgaagttttacaaaaagcggcgacgcgg
tggccaaagttgactatcgattttatgaccatccatgccagcaaagggcagcaggctgat
tatgtcattatcgttggcttacatgagggtaatgatgggttcccagccgcggcgcgggaa
tctgtactggaagatgtgttgctacctcctcccgaagatttccctgatgctgaagagcgg
cgtttgctttatgtcgcaataacgcgtgctaagcaccaagtgtggttactacaagatacg
gcacggccttctatttttgtctctcaactcagtgaattaggtgccctggtacaacgtaag
ccctag

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