Yersinia pestis El Dorado: CH46_3734
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Entry
CH46_3734 CDS
T03719
Symbol
ihfB
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
ypl
Yersinia pestis El Dorado
Brite
KEGG Orthology (KO) [BR:
ypl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypl03032
]
CH46_3734 (ihfB)
03036 Chromosome and associated proteins [BR:
ypl03036
]
CH46_3734 (ihfB)
03400 DNA repair and recombination proteins [BR:
ypl03400
]
CH46_3734 (ihfB)
DNA replication proteins [BR:
ypl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CH46_3734 (ihfB)
Chromosome and associated proteins [BR:
ypl03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CH46_3734 (ihfB)
DNA repair and recombination proteins [BR:
ypl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CH46_3734 (ihfB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HAAS
MDMPI_C
Motif
Other DBs
NCBI-ProteinID:
AJJ14250
UniProt:
A0AAX2HZW3
LinkDB
All DBs
Position
complement(4095537..4095821)
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AA seq
94 aa
AA seq
DB search
MTKSELIERLAGQQSHVPAKVVEDAVKEMLEHMAGTLAEGERIEIRGFGSFSLHYRAPRV
GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaacttattgaaagacttgctggccagcaatctcacgtgcctgctaag
gtcgttgaggatgcagtgaaagaaatgcttgagcatatggctggaacactagctgaaggt
gagcgcattgagatccgcggatttggcagtttttctcttcactaccgtgctccgcgtgtt
ggccgtaatccaaaaaccggtgataaagttgaactggaaggtaagtatgttccacacttt
aagccaggtaaagaattgcgagatcgcgctaatatctacggctaa
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