KEGG   Yersinia pestis El Dorado: CH46_4361
Entry
CH46_4361         CDS       T03719                                 
Name
(GenBank) type III secretion apparatus protein, YscD/HrpQ family
  KO
K03220  type III secretion protein D
Organism
ypl  Yersinia pestis El Dorado
Brite
KEGG Orthology (KO) [BR:ypl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ypl02044]
    CH46_4361
Secretion system [BR:ypl02044]
 Type III secretion system
  Type III secretion core apparatus
   CH46_4361
SSDB
Motif
Pfam: Yop-YscD_ppl_2nd Yop-YscD_ppl_1st Yop-YscD_cpl Yop-YscD_ppl_3rd Y4YQ_C T2SSB FHA BON PrgH MORN_2
Other DBs
NCBI-ProteinID: AJJ12839
UniProt: Q56975 Q7ARI2
Structure
LinkDB
Position
pCD:25924..27183
AA seq 419 aa
MSWVCRFYQGKHRGVEVELPHGRCVFGSDPLQSDIVLSDSEIAPVHLVLMVDEEGIRLTD
SAEPLLQEGLPVPLGTLLRAGSCLEVGFLLWTFVAVGQPLPETLQVPTQRKEPTDRLPRS
RLGIGLGVLSLLLLLTFLGLLGHGLWREYNQDGQLVEQEVRRLLATAAYKDVVLTSPKKE
GEPWLLTGYIQDNHARLSLQNFLESHGIPFRLELRSMEELRQGAEFILQRLGYHGIEVSL
APQAGWLQLNGEVSEEIQKQKIDSLLQAEVPGLLGVESKVRIAGNQRKRLDALLEQFGLD
SDFTVNVKGELIELRGQVNDEKLNSFNQLQQTFRQEFGNRPKLELVNVGGQPQHDELNFE
VQAISLGKVPYVVLDNHQRYPEGAILNNGVRILAIRRDAVIVSKGKREFVIQLNGGKPR
NT seq 1260 nt   +upstreamnt  +downstreamnt
gtgagttgggtctgtcgtttttatcaagggaagcaccgtggtgttgaagttgagcttcct
catgggcgctgtgtttttggttcagacccgttgcagtcagatattgttctttctgacagc
gaaatagcacccgtgcatttagtgctgatggtcgatgaagaaggtattcgcctaactgat
tctgcagaacctctactacaagaagggcttcccgtgccgttggggactcttcttcgcgcg
ggctcttgtctggaagtaggttttttactgtggacatttgtcgccgtagggcaacctttg
ccagagacgttacaggttcccacgcagagaaaagagccaaccgacaggttacctcgttca
cgacttgggattgggcttggagttctttctttattgttgcttttgacttttttggggctg
ctagggcacggattgtggcgcgagtataaccaggatggacaacttgttgagcaagaagta
cggcgcttgctggcaactgctgcttacaaggatgtcgttttaacatcgcccaaaaaagag
ggtgaaccttggttattaactggttatatccaggataatcatgcccgcttgtcactgcaa
aattttcttgagagccatggcattccattccggcttgaactgcgcagcatggaagaactg
cgtcagggggcagaattcatcctgcaacggttgggataccatggaattgaggtttcttta
gcaccgcaagcgggatggctacaattgaatggggaagtgtcagaggaaatacaaaagcaa
aaaattgatagcctgctgcaagctgaagtgccagggctgctcggtgtagaaagtaaagtg
cggattgccggtaatcaacgcaagcggcttgatgcattacttgaacaatttggtctggat
tcagatttcactgtaaatgttaaaggtgagctgattgaattacgcgggcaagtcaatgat
gaaaaattgaattcatttaatcaactacaacaaacttttcgccaagagtttggcaatcga
cctaaattagaactggtcaatgtcggggggcaaccccagcatgatgaattgaatttcgag
gtgcaagctatctcgttagggaaagtgccttatgtggtactcgacaatcatcaacgctat
ccagaaggtgccatacttaacaatggcgttcgtattctggctattcgacgcgatgcggtg
attgtgagtaaaggaaaacgggaatttgtgatccaactcaatggaggtaaacctcgatga

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