Yersinia pestis El Dorado: CH46_683
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Entry
CH46_683 CDS
T03719
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ypl
Yersinia pestis El Dorado
Pathway
ypl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ypl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CH46_683 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ypl03021
]
CH46_683 (rpoA)
03400 DNA repair and recombination proteins [BR:
ypl03400
]
CH46_683 (rpoA)
Enzymes [BR:
ypl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CH46_683 (rpoA)
Transcription machinery [BR:
ypl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CH46_683 (rpoA)
DNA repair and recombination proteins [BR:
ypl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CH46_683 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AJJ16629
UniProt:
Q8ZJ87
LinkDB
All DBs
Position
complement(771926..772915)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASINMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtcagt
tcgacgcacgccaaggtgacccttgagccgttagagcgtggctttggccatactctcggc
aacgcactgcgccgtattctgctttcatctatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactacatgagtacagcaccaaagaaggcgtacaggaagatatcctggag
atcctgctcaacctgaaagggctggcggtgagagttcagggcaaagatgaagttattctt
accctgaataaatctggcattggccctgtgactgcagccgatatcacccatgatggtgat
gtcgaaatcgtcaagccgcagcacgttatctgccacctgaccgatgaaaacgcatctatt
aatatgcgtatcaaagttcagcgtggtcgtggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccgattggtcgtctgttagtagacgcatgctatagccctgta
gagcgaattgcctacaatgttgaagcagcgcgtgtagaacagcgtaccgacctggacaag
ttggttatcgagatggaaaccaatggtacgatcgatcctgaagaggcgatccgccgtgcg
gcaactatcttggctgaacagcttgaagctttcgttgacctacgtgatgtacgtcagccg
gaagttaaagaagagaagccagagttcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagttgctgaaaacgccgaacctgggtaaaaaatctctt
actgagattaaagacgtgctcgcttcacgtggtctttctttaggcatgcgcctagaaaat
tggccaccagctagcattgctgacgagtaa
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