Yersinia pestis 91001 (biovar Microtus): YP_0040
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Entry
YP_0040 CDS
T00165
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase, omega chain
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
ypm
Yersinia pestis 91001 (biovar Microtus)
Pathway
ypm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ypm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
YP_0040 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ypm03021
]
YP_0040 (rpoZ)
03400 DNA repair and recombination proteins [BR:
ypm03400
]
YP_0040 (rpoZ)
Enzymes [BR:
ypm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
YP_0040 (rpoZ)
Transcription machinery [BR:
ypm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
YP_0040 (rpoZ)
DNA repair and recombination proteins [BR:
ypm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
YP_0040 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
AmiR_N
DUF1599
Motif
Other DBs
NCBI-ProteinID:
AAS60321
UniProt:
Q8ZJQ3
LinkDB
All DBs
Position
complement(52229..52504)
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLVAARRARQIQSGGKDALVPEENDKVTVIALREIEEGLIT
NQILDVRERQEQQEQQAAEIQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaactgttcaagacgctgtagagaaaattggtaaccgttttgacctggtg
ttggtcgctgctcgtcgggcacgtcaaatccagtccggcggtaaagacgcactggttcca
gaagagaacgataaagttactgtaatcgcgttacgtgagatcgaagaaggcctgatcacc
aatcagattctcgatgttcgtgagcgccaagagcagcaagagcagcaagccgcagagatc
caagcggttaccgccattgctgaaggtcgtcgttaa
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