Yersinia pestis 91001 (biovar Microtus): YP_0059
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Entry
YP_0059 CDS
T00165
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ypm
Yersinia pestis 91001 (biovar Microtus)
Pathway
ypm00541
Biosynthesis of various nucleotide sugars
ypm01100
Metabolic pathways
ypm01250
Biosynthesis of nucleotide sugars
Module
ypm_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
ypm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
YP_0059 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ypm01005
]
YP_0059 (rfaD)
Enzymes [BR:
ypm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
YP_0059 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ypm01005
]
Core region
YP_0059 (rfaD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
AAS60340
UniProt:
Q8ZJN4
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All DBs
Position
complement(68805..69746)
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AA seq
313 aa
AA seq
DB search
MNTMIIVTGGAGFIGSNIVKALNNIGYKDILVVDNLKDGTKFVNLVDLDIADYMDKEDFV
ASIVAGDDMGDIDAIFHEGACSSTTEWDGKYMMDNNYQYSKDILHFCLDRSIPFLYASSA
ATYGGRTDNFIEDRQYEQPLNVYGYSKFLFDQYVREILPQADSQICGFRYFNVYGPREGH
KGSMASVAFHLNNQINAGERPKLFAGSENFKRDFIYVGDVADVNLWFWQNGVSGIFNCGT
GRAESFQAVADAVVDYHQSGPVEYIEFPEKLKGRYQAYTQADLTKLRAAGYGKPFKTVAE
GVKEYLAWLNRSV
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgaatacgatgattatcgttacaggcggcgcaggtttcattggcagcaatatagttaag
gctctgaataatattggctacaaagatattctggtggttgataacctcaaagacggcact
aaattcgtcaatctggttgatctggatatcgctgattacatggataaagaagattttgtc
gccagtattgttgcgggtgatgacatgggcgatatcgatgctattttccacgaaggcgcg
tgttcttccaccaccgagtgggatggcaagtacatgatggataacaactatcagtattct
aaagatatccttcacttctgtctggatcgtagtattcctttcttatacgcctcttctgcc
gccacttacggtgggcgcactgacaactttattgaagatcgtcagtacgaacagccactt
aacgtttatggctattccaaattcttgtttgatcagtatgtgcgtgaaattctgccacaa
gccgattcgcaaatttgtggattccgttatttcaacgtttatggtccacgtgaaggccat
aagggcagcatggccagcgtcgctttccatctgaataaccaaattaatgcaggtgaaagg
cctaagttattcgcgggtagcgaaaactttaaacgtgatttcatttatgtgggtgatgtt
gctgacgttaatctgtggttctggcaaaacggcgtatccggtattttcaactgcggtact
ggccgggcagagtctttccaggctgtcgctgatgcagtggtggattatcaccaaagtggg
ccagtcgaatacatcgagttccctgaaaaactgaaaggccgctatcaggcatatacacaa
gccgatctcactaaattacgggctgccggttatggtaaaccgtttaaaacggtcgctgaa
ggcgttaaagaatatctggcctggctcaatcgctcagtctaa
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