Yersinia pestis 91001 (biovar Microtus): YP_0234
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Entry
YP_0234 CDS
T00165
Symbol
soxR1
Name
(GenBank) MerR-family transcriptional regulator
KO
K13638
MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
Organism
ypm
Yersinia pestis 91001 (biovar Microtus)
Brite
KEGG Orthology (KO) [BR:
ypm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ypm03000
]
YP_0234 (soxR1)
Transcription factors [BR:
ypm03000
]
Prokaryotic type
Helix-turn-helix
MerR family
YP_0234 (soxR1)
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Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR-DNA-bind
MerR
Spectrin_Anc-1_2
HTH_3
DUF1836
Motif
Other DBs
NCBI-ProteinID:
AAS60510
UniProt:
Q8CZI8
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All DBs
Position
234484..234918
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AA seq
144 aa
AA seq
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MDNMLKIGQLAKLADVTPDTIRYYEKQGMMDHGERTDGGYRLYTDQDLQRLRFIRYAKQL
GFTLDTIAELLSIRIDPDHHTCQESKSIVDSRLSDVEGKIRELERMRDSLKRLSEACCGT
SHATTYCSILEALEQGATEELIKV
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
gtggacaatatgttaaaaatcgggcagttagctaaacttgctgatgtaacgccggatact
atccgttactacgaaaagcagggaatgatggatcacggtgaacgaactgatggtggctac
cggctgtatactgatcaggaccttcagcgtttacggtttatccgctacgccaagcaacta
ggctttacattggatactatcgcagaattattgtcgatccggatagatcctgaccatcat
acctgccaggagtccaagtctattgtagattcacggcttagtgatgtggaaggtaagatc
agagaattagagagaatgcgtgattccctaaaaagactcagcgaggcttgttgtggcact
agtcatgcgacgacatactgctcaatattggaagctttggagcagggggcaacagaagag
ttaattaaggtatga
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