Yersinia pestis 91001 (biovar Microtus): YP_2338
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Entry
YP_2338 CDS
T00165
Symbol
menD
Name
(GenBank) menaquinone biosynthesis protein
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
ypm
Yersinia pestis 91001 (biovar Microtus)
Pathway
ypm00130
Ubiquinone and other terpenoid-quinone biosynthesis
ypm01100
Metabolic pathways
ypm01110
Biosynthesis of secondary metabolites
ypm01240
Biosynthesis of cofactors
Module
ypm_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
ypm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
YP_2338 (menD)
Enzymes [BR:
ypm01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
YP_2338 (menD)
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Motif
Pfam:
TPP_enzyme_M_2
TPP_enzyme_N
TPP_enzyme_C
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AAS62544
UniProt:
Q7CJ76
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Position
complement(2600048..2601751)
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AA seq
567 aa
AA seq
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MSTSVFNRRWAALLLEALTRHGVRHICIAPGSRSTPLTLAAAANPSLVCHTHFDERGLGH
LALGLAKASTEPVAVIVTSGTAVANLYPALIEAGLTGERLILLTADRPPELIDCGANQAI
RQQGLFASHPTLSVNLPRPTPDISARWLVSTLDSAMAQLQHGALHINCPFAEPLYGGDEQ
QYADWSASLGDWWQDCHPWLRQTCYPPSLYQPPAQQADWFFWRQKRGVVIAGRMGAQEGR
QLTAWAAMLGWPLIGDVLSQTGQPLPCADLWLAHPRAQETLAQAQMVLQFGSSLTSKRLL
QWQTACQPQEYWLVDSAPGRLDPANHRGRRIICPVGEWLSRHPAQRRTPWATELAAYSES
AQAQVIETLAGQFSEAAVAHQLAELLPDNGQLFVGNSLIVRLIDALGQLPAGYPVYSNRG
ASGIDGLLSTAAGVQRATAKPTLAIVGDLSALYDLNALALLRQSSAPMVLLVINNNGGQI
FSLLPTPEAERQRFYCMPQDVNFEHAAVMFSLGYARPNSWPQLRELVHQCWLRGGTTLIE
VQVPPSQGAETLQQLVQQVTLIPQVAP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaagtgtttttaaccgtcgttgggcggcactgctactggaggctttgacccgc
cacggtgtgcgtcatatctgtattgccccagggtctcgctctacaccgttaacgttagcg
gctgccgctaatccgtcgttggtttgccatacccattttgatgagcgcggtctgggccat
ctggctctggggctggcgaaggcctcaacagaaccggtggcggtcattgtcacctcgggt
acggcggtggcgaatctttatcctgcgctaatcgaagcggggttaacgggtgagcggctg
atattattgaccgctgatcgcccaccggagttaatcgattgcggtgccaatcaggctatc
cgccagcaggggctgtttgccagccatccaaccctaagtgttaatctccccagaccgacg
cccgatatctctgcccgttggttggtttccacactcgacagcgcgatggcgcaattgcaa
catggcgctttgcacattaattgtccctttgctgaaccactgtatgggggggatgagcaa
cagtatgccgactggtctgcctcgctgggcgattggtggcaggattgtcacccatggctg
cgtcaaacctgttacccgccctctctttatcaaccaccagcacagcaagctgactggttt
ttctggcggcaaaaacgtggcgtcgtgattgccggacggatgggcgcgcaagagggtagg
caactgaccgcatgggctgcaatgctgggctggccactgattggcgatgtattgtcacaa
accggtcagccattgccttgtgctgacttatggctggcgcacccacgggcgcaagaaacc
ctcgctcaagcacagatggtgttgcaatttggcagcagtctgaccagtaagcgcctttta
caatggcagaccgcatgtcagccacaggaatactggctggtggatagcgccccaggccgc
cttgatcctgctaaccatcgtggccgacgtattatttgcccggtgggcgagtggttgagt
cggcaccccgcgcagcggcgtacaccttgggccacggaactggcggcatattcggaaagt
gcgcaagcacaggtgatcgagacgctggccggccaattcagtgaggccgccgtggcacat
cagctcgcggaattattaccggataacggccagctatttgttggcaacagtttgattgtc
cggttgattgatgcgctggggcagctacccgcaggctatccggtttacagcaatcggggg
gccagcggtatcgatggtttgctgtcaaccgccgccggtgtacagcgcgcgacggcgaaa
ccgacattagctatcgtcggtgatttgtctgccttatatgaccttaatgcgctggcactt
ttgcgccagagctcggcaccgatggtgctactggtgatcaataacaatggggggcagatt
ttctctttattgccaacgccagaggccgagcgccagcgtttctactgtatgccgcaggat
gtgaacttcgaacacgcggcggttatgttcagcttaggttatgctcgccctaatagctgg
cctcagctacgggagctagtgcatcaatgctggctacgggggggaaccacgctgattgaa
gtccaggtgccaccaagtcagggggcagaaacactgcaacagttagtacaacaggtgaca
ttaataccgcaggtggccccatga
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