Yersinia pestis 91001 (biovar Microtus): YP_3186
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Entry
YP_3186 CDS
T00165
Symbol
rffA
Name
(GenBank) putative lipopolysaccharide biosynthesis protein
KO
K02805
dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:
2.6.1.59
]
Organism
ypm
Yersinia pestis 91001 (biovar Microtus)
Pathway
ypm00541
Biosynthesis of various nucleotide sugars
ypm01100
Metabolic pathways
ypm01250
Biosynthesis of nucleotide sugars
Module
ypm_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
ypm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
YP_3186 (rffA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ypm01007
]
YP_3186 (rffA)
Enzymes [BR:
ypm01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.59 dTDP-4-amino-4,6-dideoxygalactose transaminase
YP_3186 (rffA)
Amino acid related enzymes [BR:
ypm01007
]
Aminotransferase (transaminase)
Others
YP_3186 (rffA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
OKR_DC_1
Androglobin_V
Motif
Other DBs
NCBI-ProteinID:
AAS63354
UniProt:
Q8D1K2
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All DBs
Position
3556090..3557295
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AA seq
401 aa
AA seq
DB search
MLLYVSIFVVVPPLRVPRIGYAGDEMIPFNTPPIVGTELGYMQAAMSSGKLCGDGGFTRR
CQQWMEKRFNCPKVLLTPSCTASLEMAALLLDIKPGDEVIMPSFTFVSTANAFVLRGAKM
VFVDIRPDTMNIDETKIEAAITDKTRVIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQ
GVMSTYKGKALGTIGHIGCFSFHETKNYTAGGEGGATLINDPSLIDRAEIIREKGTNRSQ
FFRGQVDKYTWRDIGSSYLMSDLQAAYLWGQLEAAEQINERRLALWHGYYNAFKPLADAG
RIDLPVIPGNVVQNAHMFYIKLRDIEERSAFISYLKEADIMAVFHYIPLHACPAGEAFGR
MAGEDRFTSKESERLVRLPIFYNLTDVNQSTVINTVLSFFV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
ttgctgctttacgtctctatattcgtagtggtgcctccattgagagtaccgcgtattggt
tatgcaggggatgagatgattccatttaacactccaccgatagtgggcactgaactgggt
tatatgcaggctgcgatgagcagtggcaagttatgcggtgatggtggttttacccgtcgc
tgccagcagtggatggagaaacgttttaactgcccaaaagtgttactgacgccatcttgt
accgcctcgttggaaatggccgcgttattgctggatatcaagcccggtgatgaagtgatc
atgccaagttttacctttgtttctaccgccaatgcctttgtgctgcgcggggccaaaatg
gtgtttgtcgatatccgtccagacaccatgaatatcgatgaaaccaagattgaagcggcg
atcaccgataaaacccgggttattgtgccagtccactacgcaggggttgcctgtgagatg
gataccatcatggcactggcgaaaaagcataatttgtttgtggtagaagatgcggctcaa
ggcgtgatgtcaacctacaaaggtaaagctctgggtaccattggccatattggctgcttc
agcttccatgaaaccaaaaattacactgcgggcggtgaaggtggggcgacgttgatcaat
gatccttcattgattgatcgtgcagaaattatccgtgaaaagggcaccaaccgtagccaa
ttcttccgtggtcaggtggataaatacacctggcgtgacatcggctccagctacttgatg
tctgatttacaggccgcttacctgtggggccagttagaggcagcagagcagatcaacgaa
cgccgtctggcgctatggcatggttattataatgctttcaaaccgttggccgatgctggg
cgcattgatttaccggtgatcccaggcaacgtggtgcaaaatgcccacatgttttatatt
aaactgcgtgatattgaggagcgctctgcatttatcagctatttaaaagaagcggatatt
atggcggtattccactacatcccattacatgcgtgtccagcaggtgaggcgtttggccgt
atggctggcgaagaccgctttacctccaaggagagtgagcgtctggtgcgcttacctatt
ttctacaacctgactgatgttaatcagagcacggttattaatactgtgctgagtttcttc
gtctga
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