KEGG   Yersinia pestis 91001 (biovar Microtus): YP_3202
Entry
YP_3202           CDS       T00165                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
ypm  Yersinia pestis 91001 (biovar Microtus)
Pathway
ypm00300  Lysine biosynthesis
ypm00470  D-Amino acid metabolism
ypm01100  Metabolic pathways
ypm01110  Biosynthesis of secondary metabolites
ypm01120  Microbial metabolism in diverse environments
ypm01230  Biosynthesis of amino acids
Module
ypm_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ypm00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    YP_3202 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    YP_3202 (dapF)
Enzymes [BR:ypm01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     YP_3202 (dapF)
SSDB
Motif
Pfam: DAP_epimerase CntK_N Plk4_PB1
Other DBs
NCBI-ProteinID: AAS63370
UniProt: P46357
LinkDB
Position
3574042..3574866
AA seq 274 aa
MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHTGVGFDQMLVVEPPYDPELDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKREISVSTQTGRMILSVTEDEQVCVNMGE
PDFEPQTVPFRAAKAEKTYILRAAEHTVLCGVVSMGNPHCVMQVDDVSVANVALLGPVLE
NHERFPERANIGFMQVVSRDHIRLRVYERGAGETQACGSGACAAVAVGVVQDLLNENVHV
ELPGGSLHIRWQGPGHPLYMTGPATHVYDGFIHL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcagttctccaaaatgcacggtcttggcaacgactttatggttgttgatgcagtgact
caaaatgtttacttttcgccggaattgatccgccgattagcagaccggcacacgggtgtg
ggctttgatcagatgctggtagttgagccgccctacgaccccgagctggattttcactac
cgtatttttaatgccgatgggagtgaagtctcccagtgtggtaatggcgcacgctgcttt
gcccgttttgttcgtttgaaagggctgaccaataagcgcgagatcagcgtcagtacgcaa
actggccgtatgatcctaagcgtgacagaagatgaacaggtttgcgtcaatatgggcgag
cctgattttgaaccgcaaactgtcccttttcgcgccgccaaagcggagaaaacctatatt
ttacgcgccgcagagcatacggtgctgtgtggcgtggtgtcgatgggcaacccccactgt
gtgatgcaggtcgatgatgtttcggttgccaacgtggcgttgctcggtccagtattggaa
aaccacgagcgtttccctgagcgggcaaatatcggctttatgcaggtcgtcagtcgcgac
cacattcgtttacgggtgtatgagcgtggggccggtgaaacacaagcctgtggcagtggt
gcatgtgctgcggtggccgtcggggtggtgcaagacttattgaacgaaaatgtgcatgtc
gaattgccgggcggcagtttacacatccgttggcaggggccaggccatccgttgtatatg
accgggcctgccacccatgtctatgacggatttattcatttatga

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