Yersinia pestis 91001 (biovar Microtus): YP_3206
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Entry
YP_3206 CDS
T00165
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ypm
Yersinia pestis 91001 (biovar Microtus)
Pathway
ypm03420
Nucleotide excision repair
ypm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ypm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
YP_3206 (uvrD)
03430 Mismatch repair
YP_3206 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypm03400
]
YP_3206 (uvrD)
Enzymes [BR:
ypm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YP_3206 (uvrD)
DNA repair and recombination proteins [BR:
ypm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
YP_3206 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
YP_3206 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
YccJ
PhoH
DUF4391
Motif
Other DBs
NCBI-ProteinID:
AAS63374
UniProt:
Q8D1J9
LinkDB
All DBs
Position
3577355..3579523
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AA seq
722 aa
AA seq
DB search
MPMDVSDLLDSLNEKQRDAVAAPRGNLLVLAGAGSGKTRVLVHRIAWLLSVENASPYSII
SVTFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHLDANLPQDFQILDSDD
QLRLLKRLVKALNLDEKQWPPRQAMWYINGKKDEGLRPQHIESYGNPVEATWLRIYQAYQ
EACDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNNIQYAWIRLLAG
ERSNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSIILAAANALIA
NNDGRMGKNLWTDGAEGEPISLYCAFNELDEARFVVNRIKAWQDNGGALNDCAILYRSNA
QSRVLEEALLQTATPYRIYGGQRFFDRQEIKDSLAYLRLISNRNDDAAFERVVNTPTRGI
GDRTLDVVRQTARDRQLTLWQSTRAMLQEKVLAGRAASALQRFVELIDSLARETADMPLH
VQTDRVIRDSGLWSMYEQEKGEKGQARIENLEELVTATRQYSYQDEDQDLMPLQAFLSHA
ALEAGDGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL
AYVGLTRAMQKLTLCYAESRRLYGKEVNHRPSRFIGELPQECVEEVRLRASVSRPVNHRR
MGTPMHENDSGFSLGQRVRHPKFGEGTIVNLEGSGEHNRLQVAFPGEGIKWLVAAYARLE
PV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
gtgcctatggacgtttctgatctgctcgacagcctgaatgaaaaacaacgtgacgccgtg
gccgcgccgcgcggcaacttgttggtactggccggtgcaggcagtggcaaaacgcgggtg
ctggttcaccgtatcgcctggctgttgtcggtagagaatgcctcgccgtattcgattatc
tcggtaacctttaccaataaagcggcggctgaaatgcgccaccgtattgaacatctgatt
ggcaccagccaaggcgggatgtggatcgggactttccacggtttggcgcaccgtctgctg
cgtgctcaccatctggatgccaatctgccacaagattttcaaatcctggatagcgatgac
caactgcggttattgaaacgcctggtcaaagcactcaatttggatgagaaacaatggccc
ccgcgtcaggcgatgtggtacatcaacggcaaaaaagacgaagggctgcgcccgcaacat
attgagagctacggtaatccggttgaggccacctggctacgtatctatcaggcttatcag
gaagcgtgcgaccgcgcgggtctggttgattttgccgagctgttgctacgagcgcacgag
ctgtggctgaacaaaccacatattcttaatcattatcgtgaacgctttaccaacattttg
gtggatgagtttcaggataccaacaacatccaatatgcctggatccgcttgttggccggt
gaacgttccaatgtgatgatcgtcggcgacgatgaccagtcaatctatggttggcgcggc
gcgcaggtcgagaatatccaacgtttcttgaaggatttccccggtgcggagaccatccgc
ctggagcagaattaccgctcgaccagcatcattctggctgccgccaatgccctgattgcc
aacaatgacggccgcatgggtaaaaatctgtggaccgatggcgcggagggcgaacctatc
tccctctattgtgcgtttaacgagttagatgaagcccgttttgtggtcaatcgtatcaaa
gcctggcaggacaacggcggtgcgctgaatgattgtgccattttgtaccgtagcaacgcc
caatcgcgcgtattagaagaagcgttactgcaaacggcaaccccgtaccgtatttatggg
gggcagcgcttcttcgaccgccaggaaattaaagactcactggcttatctgcgcctgatc
tccaatcgtaatgacgacgccgcgtttgaacgggtggtgaatacacccactcgggggatt
ggcgatcgcacattggatgtggtgcgtcaaaccgcccgtgaccgccagttaacgctatgg
caatcaacccgtgccatgttgcaggaaaaagtgctggcagggcgtgccgcgtccgcatta
caacgctttgtcgagctgatcgattcactggcgcgcgaaacggctgatatgccgctacac
gtgcaaactgatcgcgttattcgtgattctggcttgtggtcgatgtacgaacaggaaaaa
ggcgagaaaggtcaggcacgtatcgagaaccttgaagagctggttacggcgacccgtcaa
tacagctatcaggatgaagatcaggatctgatgccgctacaggccttcttatcccatgcg
gcactggaagccggagatggccaggccgatgcctatcaggatgcggtgcaattaatgact
ctccattcagcgaaaggcttggagtttccacaggtatttattgtgggaatggaagaaggg
atgttcccgagccaaatgtcattggatgagggggggcgtttggaagaggagcggcgtttg
gcctacgtggggttaacccgtgcgatgcagaaactgacgttatgttacgccgaaagccgc
cgcctatacggtaaagaggtcaatcaccgcccttcacgctttatcggcgaactgccgcag
gagtgcgtcgaagaggtccggctgcgcgccagtgtttcccgcccggtgaatcaccgccga
atggggactccgatgcacgagaatgacagcggtttctcattgggccagcgagtgcggcac
cctaaatttggcgagggtactattgtgaatttggaaggcagtggtgagcacaaccggttg
caggttgccttccccggagaggggattaagtggctggtcgcggcctatgcgcgtctggaa
cccgtgtaa
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