KEGG   Yersinia pestis 91001 (biovar Microtus): YP_pCD40
Entry
YP_pCD40          CDS       T00165                                 
Symbol
yscQ
Name
(GenBank) putative type III secretion protein YscQ
  KO
K03225  type III secretion protein Q
Organism
ypm  Yersinia pestis 91001 (biovar Microtus)
Pathway
ypm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ypm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    YP_pCD40 (yscQ)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ypm02044]
    YP_pCD40 (yscQ)
Secretion system [BR:ypm02044]
 Type III secretion system
  Type III secretion core apparatus
   YP_pCD40 (yscQ)
SSDB
Motif
Pfam: FliMN_C
Other DBs
NCBI-ProteinID: AAS58559
UniProt: P42713
LinkDB
Position
pCD1:complement(28622..29545)
AA seq 307 aa
MSLLTLPQAKLSELSLRQRLSHYQQNYLWEEGKLELTVSEPPSSLNCILQLQWKGTHFTL
YCFGNDLANWLTADLLGAPFFTLPKELQLALLERQTVFLPKLVCNDIATASLSVTQPLLS
LRLSRDNAHISFWLTSAEALFALLPARPNSERIPLPILISLRWHKVYLTLDEVDSLRLGD
VLLAPEGSGPNSPVLAYVGENPWGYFQLQSNKLEFIGMSHESDELNPEPLTDLNQLPVQV
SFEVGRQILDWHTLTSLEPGSLIDLTTPVDGEVRLLANGRLLGHGRLVEIQGRLGVRIER
LTEVTIS
NT seq 924 nt   +upstreamnt  +downstreamnt
atgagtttgttaaccttgccacaggccaaattaagtgaactgtcgctacgtcaacggctc
agccattatcaacaaaactacttgtgggaagagggaaaactcgaacttaccgtctctgag
cctccttcgtctttgaactgtatattacagttacaatggaagggaacgcacttcacgctc
tactgttttggcaatgatctggctaactggttaaccgccgacttactaggggctccattc
tttactctgccgaaagagttgcaacttgcgctgttggaacgccagacagttttcctgccg
aaactggtctgtaatgatatagcgacagcgtctctttctgtcacgcaacctctgttgagt
ttgcggctgtcccgagataatgcgcatatctccttctggctaacctcagctgaggctctg
ttcgctctgttacccgcacgacccaattctgagcgcatacctttgcctatccttatttct
ttgcgttggcataaagtatacctgactctagatgaggttgattcccttcgattaggtgat
gtgttgttggcccctgaggggagtgggcctaattcgccagtactcgcctatgttggtgag
aacccttggggctactttcaattacaatcaaataaattggagtttatcggtatgagtcat
gaatctgacgaacttaaccccgaaccattgaccgatttgaaccaacttccggttcaagtt
agctttgaagtggggcggcaaatcttagattggcacacactcactagcctggagccgggt
tctcttattgatcttacaacacctgttgatggtgaagtgcgcttgctggctaacggccgg
ttgcttggacatggtcgattggtcgagatccaagggcgcctcggggttcgaattgaacgc
ctgacagaggttacgatttcatga

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