Yersinia pseudotuberculosis IP 32953 (serotype 1): BZ17_2393
Help
Entry
BZ17_2393 CDS
T03832
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ypo
Yersinia pseudotuberculosis IP 32953 (serotype 1)
Pathway
ypo00300
Lysine biosynthesis
ypo00470
D-Amino acid metabolism
ypo01100
Metabolic pathways
ypo01110
Biosynthesis of secondary metabolites
ypo01120
Microbial metabolism in diverse environments
ypo01230
Biosynthesis of amino acids
Module
ypo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ypo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BZ17_2393 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BZ17_2393 (dapF)
Enzymes [BR:
ypo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BZ17_2393 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Plk4_PB1
Motif
Other DBs
NCBI-ProteinID:
AJJ56751
UniProt:
Q66FZ5
LinkDB
All DBs
Position
complement(2666359..2667183)
Genome browser
AA seq
274 aa
AA seq
DB search
MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHTGVGFDQMLVVEPPYDPELDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKREISVSTQTGRMILSVTEDEQVCVNMGE
PDFEPQTVPFRAAKAEKTYILRAAEHTVLCGVVSMGNPHCVMQVDDVSVANVALLGPVLE
NHERFPERANIGFMQVVSRDHIRLRVYERGAGETQACGSGACAAVAVGVVQDLLNENVHV
ELPGGSLHIRWQGPGHPLYMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggtcttggcaacgactttatggttgttgatgcagtgact
caaaatgtttacttttcgccggaattgatccgccgattagcagaccggcacacgggtgtg
ggctttgatcagatgctggtagttgagccgccctacgaccccgagctggattttcactac
cgtatttttaatgccgatgggagtgaagtctcccagtgtggtaatggcgcacgctgcttt
gcccgttttgttcgtttgaaagggctgaccaataagcgcgagatcagcgtcagtacgcaa
actggccgtatgatcctaagcgtgacagaagatgaacaggtttgcgtcaatatgggcgag
cctgattttgaaccgcaaactgtcccttttcgcgccgccaaagcggagaaaacctatatt
ttacgcgccgcagagcatacggtgctgtgtggcgtggtgtcgatgggcaacccccactgt
gtgatgcaggtcgatgatgtttcggttgccaacgtggcgttgctcggtccagtattggaa
aaccacgagcgtttccctgagcgggcaaatatcggctttatgcaggtcgtcagtcgcgac
cacattcgtttacgggtgtatgagcgtggggccggtgaaacacaagcctgtggcagtggt
gcatgtgctgcggtggccgtcggggtggtgcaagacttattgaacgaaaatgtgcatgtc
gaattgccgggcggcagtttacacatccgttggcaggggccaggccatccgttgtatatg
accgggcctgccacccatgtctatgacggatttattcatttatga
DBGET
integrated database retrieval system
