Yersinia pseudotuberculosis IP 32953 (serotype 1): BZ17_2417
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Entry
BZ17_2417 CDS
T03832
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ypo
Yersinia pseudotuberculosis IP 32953 (serotype 1)
Pathway
ypo00521
Streptomycin biosynthesis
ypo00523
Polyketide sugar unit biosynthesis
ypo00525
Acarbose and validamycin biosynthesis
ypo00541
Biosynthesis of various nucleotide sugars
ypo01100
Metabolic pathways
ypo01110
Biosynthesis of secondary metabolites
ypo01250
Biosynthesis of nucleotide sugars
Module
ypo_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
ypo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BZ17_2417 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BZ17_2417 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
BZ17_2417 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BZ17_2417 (rfbB)
00525 Acarbose and validamycin biosynthesis
BZ17_2417 (rfbB)
Enzymes [BR:
ypo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
BZ17_2417 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
AJJ53907
UniProt:
Q66G12
LinkDB
All DBs
Position
complement(2689212..2690279)
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AA seq
355 aa
AA seq
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MRRILVTGGAGFIGSAVVRHIIDGTSDSVVVVDKLTYAGNLESLSVVAGSERYAFEQVDI
CDRSELDRVFAQYQPNVVMHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQQLS
VEAKQAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGL
PTLVTNCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGNGAQVRDWLYVEDHARALYQVV
TEGVVGETYNIGGHNERKNIEVVETICALLDELVPAKPAGIAHYRDLITYVKDRPGHDMR
YAIDAGKIERELGWRPQETFESGIRKTVLWYLNNESWWRRVQDGSYAGERLGLSD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
ttgaggcgaattctcgtcacaggcggggccggttttatcggctctgcggtggtcaggcat
attattgatggcacctcagatagcgtggtggtggtcgataaactcacctacgccggtaat
ctggagtcgctgtcagtggttgcgggcagtgagcgttatgctttcgaacaagtcgatatc
tgtgaccgcagtgagttggatcgggttttcgcacagtatcagccgaatgtggtgatgcat
ttggctgccgagagccacgttgaccgctcaattgatggccccgccgcgtttatcgagacg
aacgtggttggcacttacaccctgttggaagctgcccgtcactattggcaacaactgagt
gttgaagccaagcaggcgttccgctttcaccatatctcaacggatgaggtgtatggcgat
ttacacggcactgacgatttgtttaccgaaaccacgccgtatgcgccaagcagcccatat
tcggcgtctaaagcgtccagtgaccatttagtccgggcttggttgcgtacttatggttta
ccgactttggtgactaattgttcaaataattacggcccgtatcacttcccagaaaagctg
atcccgctggttattttaaatgcgttggcgggtaagccgctgcctgtttatggcaatggt
gctcaggtccgcgactggttgtatgtagaagaccacgccagagcgttgtatcaggtggtt
actgagggtgtggtgggtgaaacctacaatatcggcggccataatgagcgcaagaatatt
gaagtagttgaaaccatttgcgcgctattggatgagttggtgccagcaaaaccggcgggt
atcgcacactaccgtgatttgattacctacgtaaaagaccggccgggtcatgatatgcgc
tatgccattgatgctggcaagattgagcgggaactgggttggcgtccacaagaaaccttc
gaaagcggtatccgtaaaacggtcttgtggtatttgaataatgaatcttggtggcgtcgt
gttcaggatggctcttacgccggagagcgtttgggcttgagtgactaa
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