Yersinia pseudotuberculosis IP 32953 (serotype 1): BZ17_944
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Entry
BZ17_944 CDS
T03832
Name
(GenBank) hypothetical protein
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
ypo
Yersinia pseudotuberculosis IP 32953 (serotype 1)
Pathway
ypo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ypo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BZ17_944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypo03400
]
BZ17_944
Enzymes [BR:
ypo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
BZ17_944
DNA repair and recombination proteins [BR:
ypo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BZ17_944
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BZ17_944
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BZ17_944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
YkoP
Motif
Other DBs
NCBI-ProteinID:
AJJ55127
UniProt:
Q66C41
LinkDB
All DBs
Position
1003775..1005205
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AA seq
476 aa
AA seq
DB search
MSDKNKQPTFYVHDYETFGQRPALDRPAQFAGVRTDLDFNLVEEPLVIYCKPADDYLPQP
EAVMITGITPQHALANGVNEAEFSRQIHQAFSVPGTCILGYNNIRFDDEVSRNIFYRNFY
DPYAYSWQGGNSRWDLLDVMRACYALRPEGIVWPENDDGLPSFKLEHLTKANGVEHLQAH
DAMSDVYATIAMAKLVKQAQPRLFDYLYQHRSKHKINALIDIAEMTPLVHVSGMFGAARG
NTSWVAPLAWHPENKNAVIMCDLAGDMSPLLELDSDTLRERLYTRRDKLQAQESAIPIKL
VHINKCPVLAPAKTLLPENADRLGIDRQRCLQNLQLLRQNPQVREKVVALFAQAEPFAVT
DDVDTQLYNGFFSDADRATMKIIQQTEPQNLPALDLTFQDPRLEALLFRFRARNYPNTLN
NSEQQRWLQHRREALSPERVQDYVLQLEQFYNQYEDDKEKLALLKALFEYAKGLVS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataaaaataagcaaccaacattttacgtccacgattatgaaaccttcggccag
cggccagccttggatagacctgcgcaatttgccggggtacgtaccgatctggatttcaat
ctcgtcgaagagccattggtcatttactgcaagcccgcagatgattatctgccacagccc
gaagcggtgatgataaccggtattaccccccaacatgctttagccaacggggtcaatgaa
gctgagttttcccgccaaatacaccaggccttttcggtacccggcacctgtatcctcggc
tacaacaatattcgttttgatgatgaagtcagtcgcaacattttctatcgtaatttttat
gatccctatgcctacagttggcaggggggaaattcccgttgggatctgttggatgtgatg
cgcgcctgctatgccctgcgcccagaaggtattgtttggcccgaaaatgatgatggcctg
cccagctttaaactggaacatttgaccaaagccaatggcgtcgaacatttacaggcacat
gatgcgatgtccgatgtctacgccaccattgcaatggcaaaattggtgaaacaggcccaa
ccccgtctgtttgattatctgtatcagcaccgcagtaagcataagatcaatgcgttgatt
gatatcgcggagatgacaccactggttcatgtgtctggcatgtttggtgccgcacggggc
aacaccagttgggtggcaccgctggcctggcaccccgagaataaaaatgcggtaattatg
tgcgatctggccggggatatgtccccattactggagttggacagcgatacattgcgcgaa
cgtctgtatacccgccgtgacaagctccaagcccaagagtcggcaatccctatcaaactg
gtacatatcaataaatgtccggtattggctcctgcaaaaactctgctgcccgagaatgct
gatcgcttggggattgatcgccagcgttgtttgcaaaatctgcaactgctgcggcaaaac
ccgcaggtgcgtgaaaaagtggtcgcgctgtttgcacaagctgagccattcgcggttacc
gatgatgtggatacacagttgtataacggctttttcagtgatgctgaccgcgccaccatg
aagattatccagcaaactgagccacaaaatctgccagcactggatttgacatttcaggac
ccacggttggaggccctgctattccgcttccgcgcccgtaactacccaaataccttgaat
aacagtgaacaacagcgttggttacagcatcgccgtgaagcgcttagccctgagcgggta
caagattatgttttgcaactggaacaattttataaccagtatgaagacgataaagagaaa
cttgcgctgctaaaagcgttgtttgaatatgccaagggattagtgagttaa
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