Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_0008
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Entry
YPDSF_0008 CDS
T00505
Name
(GenBank) L-threonine ammonia-lyase
KO
K01754
threonine dehydratase [EC:
4.3.1.19
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp00260
Glycine, serine and threonine metabolism
ypp00290
Valine, leucine and isoleucine biosynthesis
ypp01100
Metabolic pathways
ypp01110
Biosynthesis of secondary metabolites
ypp01200
Carbon metabolism
ypp01230
Biosynthesis of amino acids
Module
ypp_M00570
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
YPDSF_0008
00290 Valine, leucine and isoleucine biosynthesis
YPDSF_0008
Enzymes [BR:
ypp01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.19 threonine ammonia-lyase
YPDSF_0008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
ETF
Motif
Other DBs
NCBI-ProteinID:
ABP38435
LinkDB
All DBs
Position
complement(10146..11108)
Genome browser
AA seq
320 aa
AA seq
DB search
MNTLFDAIREAHQILRPQVRVTPLEHSPLLSQHSGCEIYLKCEHLQHTGSFKFRGASNKL
RLLNEAQRQQGVITASTGNHGQGVALAAKLAGIKSTIYAPEQAAAIKLDVIRALGGQIEL
VSGDALNAELAAGIAAEQQGKVYISPYNDPQVIAGQGTCGMEMVEQQPDLDAVFVAVGGG
GLISGIATVLKTLSDKTQVIGCWPANATSLYTCLEKGQIQEVAEQETLSDGTAGGIEPGA
ITFALCQQLIDQKVLVSEQEIKEAMGLIARTDRWMIEGAAGVALAAALKLAPQWQGKKVA
VVLCGKNIVLEKYLGAVSGC
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgttgtttgatgccatcagagaggcccaccagatattacgcccacaagtgaga
gtcacgccgttggagcatagcccactgctatctcaacacagcggttgtgagatctatctt
aaatgtgagcacctgcagcacaccggttcttttaaatttcgtggggccagtaacaagtta
cgtttactcaatgaggcacaacgccagcaaggtgtgatcaccgcctccaccggtaaccat
gggcaaggtgtggcgctggccgcaaaactggcggggattaaatccactatttacgcccca
gaacaggcggcagccatcaagctggatgtgatccgtgcactgggggggcaaattgaatta
gtctccggagatgccttaaatgctgaactggccgccggtatcgccgctgagcaacaaggt
aaagtgtatatctcaccgtataacgacccgcaggtcattgccgggcaaggcacctgtggc
atggagatggtcgaacagcagcccgatcttgatgcggtgtttgttgccgttggtggtggt
ggcctgatttcaggtattgcgaccgtattgaaaacattatcggataaaacgcaggtgatt
ggttgctggccagccaatgccaccagcctgtatacctgtctggagaaaggacagattcag
gaggtggcagagcaagaaacgctgtctgacggaaccgccggtggtatcgaaccgggagcg
atcacctttgcactgtgccaacagttaatcgatcagaaggtgctggtgagtgagcaagaa
atcaaagaggccatgggtttgattgcccgtactgaccgctggatgattgaaggtgccgcc
ggtgtggcactggctgcggcactgaaattggctccgcaatggcaaggtaagaaagtggcg
gtggtgttgtgcggtaaaaatatcgtgctggagaaatatctgggagctgtcagcggatgc
taa
Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_3509
Help
Entry
YPDSF_3509 CDS
T00505
Name
(GenBank) L-threonine ammonia-lyase
KO
K01754
threonine dehydratase [EC:
4.3.1.19
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp00260
Glycine, serine and threonine metabolism
ypp00290
Valine, leucine and isoleucine biosynthesis
ypp01100
Metabolic pathways
ypp01110
Biosynthesis of secondary metabolites
ypp01200
Carbon metabolism
ypp01230
Biosynthesis of amino acids
Module
ypp_M00570
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
YPDSF_3509
00290 Valine, leucine and isoleucine biosynthesis
YPDSF_3509
Enzymes [BR:
ypp01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.19 threonine ammonia-lyase
YPDSF_3509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Thr_dehydrat_C
Hydrolase_6
Motif
Other DBs
NCBI-ProteinID:
ABP41859
LinkDB
All DBs
Position
complement(4023259..4024803)
Genome browser
AA seq
514 aa
AA seq
DB search
MAVSQPLSAAPCGAEYLRAILRAPVYEVAQVTPLQVMEKISSRVGNTVLVKREDRQPVHS
FKLRGAYAMISSLTEEQKACGVVTASAGNHAQGVALSAHKMGIKALIVMPVATADIKVDA
VRAFGGEVLLFGANFDEAKTKAIALAQEQGYTFVPPFDHPAVIAGQGTLAMELLQQDAHL
DRVFVPVGGGGLVAGVAVLIKQLMPQIKVIGVEAEDSACLRAALDAGQPVDLARVGLFAE
GVAVKRIGDEPFRLCQEYLDDVITVDSDAICAAVKDLFEDVRAIAEPSGALALAGLKKYV
QQHNIQGERLAHVLSGANVNFHGLRYVSERCELGEQREALLAVTIPEQKGSFLRFCELLG
GRSVTEFNYRYADAENACIFVGVRLTRGYAERVEILAELQDKGYQVVDLSDDEMAKLHVR
YMVGGRPSKPLRERLFSFEFPESPGALLKFLHTLGTHWNISLFHYRSHGTDFGRVLAAFE
LSATEPQFEERLAALGYYCHDETDNPAFKFFLAG
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcagtttcgcaacccttatctgctgccccctgcggggcagaatatctgcgggcgata
ttacgtgcgccggtgtatgaggtggcgcaagtcaccccgttacaagtgatggagaaaatc
tcctcgcgcgtgggtaataccgttttagtgaagcgtgaagatcggcagccggtacacagc
tttaagttgcgcggtgcttacgcgatgatctccagcctgacggaagagcagaaagcctgt
ggcgtcgtcacggcttctgcgggtaaccatgctcaaggcgtggcgctttctgcccataaa
atggggattaaagcgctgatcgtcatgcccgttgctactgcagatattaaagttgatgcg
gtacgtgcttttggcggcgaggtgctgctgtttggcgctaattttgatgaagccaaaacc
aaagctatcgcgcttgctcaagagcagggctacacctttgtgccaccgtttgaccatccg
gcggtgattgccgggcaggggacgctggcgatggagttactgcaacaagatgcccatctt
gatcgggtttttgtcccagtgggcggcggtgggctggtggccggtgtggcggtgcttatc
aagcaattgatgccacagattaaagtgattggtgttgaagccgaggattctgcctgtttg
cgggccgcgctggatgcggggcagccggtcgatttggcgcgtgtcgggctgtttgccgag
ggcgtggcagttaagcgtatcggtgacgagcctttccgcctgtgtcaggaatatctggac
gatgtgatcaccgttgacagtgatgctatctgtgccgcagtcaaagatctgtttgaggat
gttcgcgccattgctgagccttctggtgcgttggcattggcgggcctgaaaaaatatgtg
cagcagcataatattcagggcgagcgtctggcacatgtgctttctggtgcaaacgtgaac
ttccatggtttgcgttatgtgtcagagcgttgcgagttaggtgagcagcgtgaagccctg
ctggcggtgactattccagagcaaaagggcagtttcctgcgtttctgtgaattactgggt
ggccgttcggtaacggaatttaactaccgttacgccgatgctgaaaacgcctgcattttt
gttggggtacgtttgactcgtggttatgctgagcgggttgaaattcttgctgaattgcag
gacaaaggttatcaggtggtcgatttatctgatgacgaaatggcgaaactgcatgtgcgt
tatatggttggtgggcggccctcgaaaccactgcgtgagcgcctgttcagctttgaattc
cccgagtcaccaggcgctttgctgaaattcctgcatacgttgggcactcactggaatatt
tctctgttccactaccgcagccatggcacagattttggccgggtattggcggcatttgag
ttgtcggctaccgaaccgcaatttgaagagcgcttagcggctctgggctactattgccac
gatgaaacggataacccggcgtttaagttctttttagcgggttaa
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